Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq301 80.6 8e-13 >seq301 Length=1856 Score = 80.6 bits (88), Expect = 8e-13 Identities = 133/192 (69%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || || | ||||| | | |||||| ||| | Sbjct 1500 GGGACCAAGACAAGTCATCATGGCCTGAATATTGTGGGCGATAGACGTGCCACATGTTCC 1559 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 ||||||| | || ||| | || | ||| |||| ||||||| | | | | Sbjct 1560 TATACAAAATGATGCAAAAATGTGAATTTGAGCTAATCTAATAAAGTAGGATAAAATATG 1619 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT 475 |||||||||||| || ||||||| ||||| ||||| ||||||||||| |||| || Sbjct 1620 GATTGTAGTCTGAAATTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCAC 1679 Query 476 GCTACGGTGAAT 487 | ||||||||| Sbjct 1680 GTCACGGTGAAT 1691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503992419840