Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq192 96.9 2e-18 >seq192 Length=9579 Score = 96.9 bits (106), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||||| |||||| | ||||| || ||||||||| ||||||||||| |||||||||| Sbjct 1034 TCCGAAAGC-CTCACTTAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 1090 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| || |||||||| Sbjct 1091 GGCAGGGACGTAAT-CAGCGCAAGCT 1115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300798578720