Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq192 172 7e-41 >seq192 Length=9579 Score = 172 bits (190), Expect = 7e-41 Identities = 157/193 (81%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct 1871 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTCATTATTCCATGCTAATGTATTCG 1930 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||| ||||| || || Sbjct 1931 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTAGTTCCCCCACA 1990 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGT-AATGCAGTACTCGC 182 || ||| |||| ||||| ||| || | | ||| | ||| ||| |||| | ||| Sbjct 1991 CACCCAGTGAAGGGCAT-GGGGTTCCCTAGAAGGAAAGGCCCGGTCGGACCAGTGCACGC 2049 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 2050 GGTGAGGCGGACC 2062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595197093936