Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015- 10-27] 504 sequences; 61,124,938 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq192 266 3e-69 seq503 111 2e-22 >seq192 Length=9579 Score = 266 bits (294), Expect = 3e-69 Identities = 173/189 (92%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 1984 GGAACTAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 1925 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| ||||||||||| ||||||||||| ||||||||||||| |||||||||||||| Sbjct 1924 CATTAGCATGGAATAATGAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 1866 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||||||||||||| ||||||||| |||||| ||||||||||| Sbjct 1865 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCCGTTGTCAGAGGTGAAATTC 1806 Query 181 TTGGATTTA 189 ||||||||| Sbjct 1805 TTGGATTTA 1797 >seq503 Length=220590 Score = 111 bits (122), Expect = 2e-22 Identities = 101/125 (81%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 58 ATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC 117 ||||||| |||||||||||| || || || | ||||||||| | | ||||| |||| Sbjct 179306 ATACATTGGCATGGAATAATAAAAACAGAAGTT-GATTCTATTTTATTGCTTTCTTGGAC 179248 Query 118 CGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAA 177 |||| |||||||| |||| ||||| ||||||| ||||||||| || ||| |||||||| Sbjct 179247 CGCC-GTAATGATTAATAGGGATAATCGGGGGCATCAGTATTCTGTTATCAGAGGTGAAA 179189 Query 178 TTCTT 182 ||||| Sbjct 179188 TTCTT 179184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511997500160