Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq192 266 3e-69
seq503 111 2e-22
>seq192
Length=9579
Score = 266 bits (294), Expect = 3e-69
Identities = 173/189 (92%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 1984 GGAACTAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 1925
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||
Sbjct 1924 CATTAGCATGGAATAATGAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 1866
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||||||||| ||||||||| |||||| |||||||||||
Sbjct 1865 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCCGTTGTCAGAGGTGAAATTC 1806
Query 181 TTGGATTTA 189
|||||||||
Sbjct 1805 TTGGATTTA 1797
>seq503
Length=220590
Score = 111 bits (122), Expect = 2e-22
Identities = 101/125 (81%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 58 ATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC 117
||||||| |||||||||||| || || || | ||||||||| | | ||||| ||||
Sbjct 179306 ATACATTGGCATGGAATAATAAAAACAGAAGTT-GATTCTATTTTATTGCTTTCTTGGAC 179248
Query 118 CGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAA 177
|||| |||||||| |||| ||||| ||||||| ||||||||| || ||| ||||||||
Sbjct 179247 CGCC-GTAATGATTAATAGGGATAATCGGGGGCATCAGTATTCTGTTATCAGAGGTGAAA 179189
Query 178 TTCTT 182
|||||
Sbjct 179188 TTCTT 179184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511997500160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |