Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20fructigenus_20[genbank_20GCA_5F001414455.1_202015-
10-27] 504 sequences; 61,124,938 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq192 883 0.0
seq503 271 2e-70
>seq192
Length=9579
Score = 883 bits (978), Expect = 0.0
Identities = 498/504 (99%), Gaps = 0/504 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2198 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 2257
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2258 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2317
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 2318 TCTCAGGCTCCCTCTCCGGAATAGAACCCTAATTCCCCGTTACCCGTTGAAACCATGGTA 2377
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2378 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCA 2437
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2438 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCATTGGT 2497
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2498 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 2557
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2558 AATTACCACGGTTATCCAAGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 2617
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2618 GCCATTCGCAGTTTCACCGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 2677
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 2678 AGACAAGCATATGACTACTGGCAG 2701
>seq503
Length=220590
Score = 271 bits (300), Expect = 2e-70
Identities = 177/193 (92%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 152 ATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGG 211
||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct 142776 ATTCCCCGTTACCCGTTGAAACCATGGTAGACCACTACTCTACCATCGAAAGTTGATAGG 142717
Query 212 GCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGA 271
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct 142716 GCAGAAATTTGAATGAACCATCGCCGGCCCAAGGCCATGCAATTCGTTAAGTTATTATAA 142657
Query 272 ATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAG 331
||||||||||||||||||| || |||| |||||||||||||| |||| |||||||||||
Sbjct 142656 ATCACCAAGGAGCCCCGAA-GGAATTGGCTTTTTATCTAATAAGTACAGCCCTTCCGAAG 142598
Query 332 TCGGGGTTTTTAG 344
|||| ||||||
Sbjct 142597 TCGG---TTTTAG 142588
Score = 80.6 bits (88), Expect = 8e-13
Identities = 65/79 (82%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 73 ATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC 132
||||| ||||||| ||||||| | ||||| ||||| ||| |||||||||||| |||||
Sbjct 143040 ATTGGATAATTTGTGCGCCTGTTACCTTCTTTGGACCTGGCAGCCGTTTCTCAAACTCCC 142981
Query 133 TCTCCGGAATCGAACCCTA 151
| |||||| ||||||||
Sbjct 142980 TTTCCGGAGGAGAACCCTA 142962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510392387584
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |