Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq1379 183 2e-44
seq809 78.8 5e-13
>seq1379
Length=12095
Score = 183 bits (202), Expect = 2e-44
Identities = 104/106 (98%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 5073 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 5132
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTG 106
|||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 5133 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTG 5178
>seq809
Length=117299
Score = 78.8 bits (86), Expect = 5e-13
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Minus
Query 56 CGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTG 106
||||||||||||| ||||||||||||| ||||||||| |||||||||||||
Sbjct 26567 CGCCCGATCCCTAATCGGCATAGTTTATGGTTAAGACCACGACGGTATCTG 26517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278395526460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |