Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10- 27] 1,714 sequences; 68,152,485 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1379 183 2e-44 seq809 78.8 5e-13 >seq1379 Length=12095 Score = 183 bits (202), Expect = 2e-44 Identities = 104/106 (98%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 5073 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 5132 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTG 106 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 5133 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTG 5178 >seq809 Length=117299 Score = 78.8 bits (86), Expect = 5e-13 Identities = 48/51 (94%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 56 CGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTG 106 ||||||||||||| ||||||||||||| ||||||||| ||||||||||||| Sbjct 26567 CGCCCGATCCCTAATCGGCATAGTTTATGGTTAAGACCACGACGGTATCTG 26517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278395526460