Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1379 917 0.0
seq1494 129 2e-27
>seq1379
Length=12095
Score = 917 bits (1016), Expect = 0.0
Identities = 617/686 (90%), Gaps = 4/686 (1%)
Strand=Plus/Minus
Query 1 TACGTGACCGGTGGCCTAG--CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAA 58
|| ||||| || ||||| |||||| |||||| |||||||||||||||||||||||||
Sbjct 3291 TATGTGACTGGCGGCCTTCGCCCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAA 3232
Query 59 TGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 118
||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 3231 TGCAGCTCTAAATGGGAGGTATATTTCTTCTAAAGCTAAATATGGGCCAGAGACCGATAG 3172
Query 119 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGT 178
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 3171 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGT 3112
Query 179 GAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACC-GGCCC 237
||||||||||||||||||||||||||||||||||||||| || || | ||| || ||
Sbjct 3111 GAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCTGCCGTCGATCATCCCGGGTT 3052
Query 238 CTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGC 297
||| | ||||||||| | ||||||||||||||||| | | || || ||| ||||||
Sbjct 3051 CTCC-CTGGTGCACTCGGCGGCGGTCAGGCCAGCATCGGTTTCGGTGGCGGGACAAAGGC 2993
Query 298 CCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTG 357
| ||||| || || || |||||| |||||||||||| || | |||| |||| || |
Sbjct 2992 CTTGGGAACGTAGCTCCTCTCGGGGAGTGTTATAGCCCTCGGCGCCATGCCGCCCACCGG 2933
Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417
||| |||| ||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 2932 GACCGAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGA 2873
Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477
||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| |
Sbjct 2872 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGCCAAACCCATACGCGCA 2813
Query 478 ATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT 537
|| || ||||||||||||| |||||| | |||||||| ||||||||||||||||||||||
Sbjct 2812 ATTAACGTGAACGGAGGTGAGAACCCTTCAGGGTGCATCATCGACCGATCCTGATGTCTT 2753
Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2752 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTAA 2693
Query 598 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCG 657
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2692 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCG 2633
Query 658 ATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||||||||||
Sbjct 2632 ATCGTCAAATTTGGGTATAGGGGCGA 2607
>seq1494
Length=660096
Score = 129 bits (142), Expect = 2e-27
Identities = 96/111 (86%), Gaps = 1/111 (1%)
Strand=Plus/Plus
Query 477 AATGAAA-GTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTC 535
|| |||| |||||||||||| ||||| | |||||||| |||| |||||||||| |||
Sbjct 67621 AAAGAAACGTGAACGGAGGTAAGAACCAATTAGGGTGCATCATCAACCGATCCTGCTGTA 67680
Query 536 TTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGA 586
||||||||||||| ||||||||||||||||||||||| | |||||||| ||
Sbjct 67681 TTCGGATGGATTTAAGTAAGAGCATAGCTGTTGGGACACAAAAGATGGGGA 67731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079963234700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |