Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10- 27] 1,714 sequences; 68,152,485 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1054 80.6 8e-13 >seq1054 Length=43506 Score = 80.6 bits (88), Expect = 8e-13 Identities = 133/192 (69%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || || | ||||| | | |||||| ||| | Sbjct 1949 GGGACCAAGACAAGTCATCATGGCCTGAATATTGTGGGCGATAGACGTGCCACATGTTCC 1890 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415 ||||||| | || ||| | || | ||| |||| ||||||| | | | | Sbjct 1889 TATACAAAATGATGCAAAAATGTGAATTTGAGCTAATCTAATAAAGTAGGATAAAATATG 1830 Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT 475 |||||||||||| || ||||||| ||||| ||||| ||||||||||| |||| || Sbjct 1829 GATTGTAGTCTGAAATTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCAC 1770 Query 476 GCTACGGTGAAT 487 | ||||||||| Sbjct 1769 GTCACGGTGAAT 1758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503974221440