Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1379 365 7e-99
seq369 77.0 5e-12
>seq1379
Length=12095
Score = 365 bits (404), Expect = 7e-99
Identities = 236/257 (92%), Gaps = 1/257 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4289 ACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 4348
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 4349 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 4407
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|||| ||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 4408 ACCAGCCAAAGCTAGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 4467
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 4468 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 4527
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 4528 AGAGCTCTCAATCTGTC 4544
>seq369
Length=145698
Score = 77.0 bits (84), Expect = 5e-12
Identities = 50/55 (91%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCA 57
|||| |||||||||||| ||||||||| |||||||||| ||||| ||||||||||
Sbjct 113237 CTCGTTGGCTCCGTCAGGGTAGCGCGCTTGCGGCCCAGGACATCGAAGGGCATCA 113291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796786769634
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |