Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq1379 266 3e-69
seq809 113 5e-23
>seq1379
Length=12095
Score = 266 bits (294), Expect = 3e-69
Identities = 173/189 (92%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 5798 GGAACTAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 5739
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||
Sbjct 5738 CATTAGCATGGAATAATGAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 5680
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||||||||| ||||||||| |||||| |||||||||||
Sbjct 5679 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCCGTTGTCAGAGGTGAAATTC 5620
Query 181 TTGGATTTA 189
|||||||||
Sbjct 5619 TTGGATTTA 5611
>seq809
Length=117299
Score = 113 bits (124), Expect = 5e-23
Identities = 102/126 (81%), Gaps = 2/126 (2%)
Strand=Plus/Plus
Query 58 ATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC 117
||| |||| ||||| | |||| |||||||||| |||||| | |||| ||||||| ||||
Sbjct 26049 ATATATTAGCATGGGAGAATAAAATAGGACGT-CGGTTCCAATTTGATGGTTTCTCGGAC 26107
Query 118 CGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAA 177
||| |||||||| || | | ||||||||||| ||||||||| |||||| | |||| |
Sbjct 26108 CGCT-GTAATGATCAAGAGGCATAGTCGGGGGCATCAGTATTCTGTTGTCAGAAGTGAGA 26166
Query 178 TTCTTG 183
||||||
Sbjct 26167 TTCTTG 26172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511991498560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |