Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq1379 468 1e-129
seq369 143 5e-32
>seq1379
Length=12095
Score = 468 bits (518), Expect = 1e-129
Identities = 290/309 (94%), Gaps = 1/309 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 4453 GAACGAGACCTTAACCTGCTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 4394
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4393 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 4334
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||||||||||||| ||||||||||||| | |||| ||||
Sbjct 4333 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAACGAGTT-TTTTCCTTAGCCG 4275
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4274 AAAGGTTTGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 4215
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||| ||||||||||||||
Sbjct 4214 CTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGCTGATTACGTCCCTG 4155
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 4154 CCCTTTGTA 4146
>seq369
Length=145698
Score = 143 bits (158), Expect = 5e-32
Identities = 159/213 (75%), Gaps = 22/213 (10%)
Strand=Plus/Minus
Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG----- 183
|||||||||| ||||| |||||||||| ||||||||| ||||| |||||||||||
Sbjct 113291 TGATGCCCTTCGATGTCCTGGGCCGCAAGCGCGCTACCCTGACGGAGCCAACGAGCCTTT 113232
Query 184 -TTCATCACCTTGGCCGGAAGGTCT-GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241
|| || | | | ||||| | |||||||||||| |||||||||||||||||||||
Sbjct 113231 TTTTCTCTTCCTAATTGAAAGGTTTTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGAT 113172
Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA------T 295
|||||| ||||||||||||| ||||| |||||||| | | || |
Sbjct 113171 AGAGCA---------TTGCTCTTCAACGGGGAATTTCTAGTAAGTGTAAGCCAAAGCCCT 113121
Query 296 CAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| || ||| |||| | ||||||||||||| ||
Sbjct 113120 CGGCTTGCGCTGATCATGTCCCTGCCCTTTTTA 113088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947183764992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |