Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10- 27] 1,714 sequences; 68,152,485 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1379 468 1e-129 seq369 143 5e-32 >seq1379 Length=12095 Score = 468 bits (518), Expect = 1e-129 Identities = 290/309 (94%), Gaps = 1/309 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 4453 GAACGAGACCTTAACCTGCTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 4394 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4393 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 4334 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||||||||||||| ||||||||||||| | |||| |||| Sbjct 4333 GATGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAACGAGTT-TTTTCCTTAGCCG 4275 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 4274 AAAGGTTTGGGTAATCTTGTTAAACTCCGTCGTGCTGGGGATAGAGCATTGCAATTATTG 4215 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| |||||||||||| ||||||||| ||| |||||||||||||| Sbjct 4214 CTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGCTGATTACGTCCCTG 4155 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 4154 CCCTTTGTA 4146 >seq369 Length=145698 Score = 143 bits (158), Expect = 5e-32 Identities = 159/213 (75%), Gaps = 22/213 (10%) Strand=Plus/Minus Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG----- 183 |||||||||| ||||| |||||||||| ||||||||| ||||| ||||||||||| Sbjct 113291 TGATGCCCTTCGATGTCCTGGGCCGCAAGCGCGCTACCCTGACGGAGCCAACGAGCCTTT 113232 Query 184 -TTCATCACCTTGGCCGGAAGGTCT-GGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241 || || | | | ||||| | |||||||||||| ||||||||||||||||||||| Sbjct 113231 TTTTCTCTTCCTAATTGAAAGGTTTTGGGTAATCTTGTGAAACTCTGTCGTGCTGGGGAT 113172 Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA------T 295 |||||| ||||||||||||| ||||| |||||||| | | || | Sbjct 113171 AGAGCA---------TTGCTCTTCAACGGGGAATTTCTAGTAAGTGTAAGCCAAAGCCCT 113121 Query 296 CAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | || ||| |||| | ||||||||||||| || Sbjct 113120 CGGCTTGCGCTGATCATGTCCCTGCCCTTTTTA 113088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947183764992