Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20infarciens_20[genbank_20GCA_5F001414345.1_202015-10-
27] 1,714 sequences; 68,152,485 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq520 255 1e-65
seq1379 205 2e-50
>seq520
Length=1238
Score = 255 bits (282), Expect = 1e-65
Identities = 215/260 (83%), Gaps = 3/260 (1%)
Strand=Plus/Plus
Query 20 ATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 79
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7 ATTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 65
Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCC 139
|||||| ||||||||||||||||||||||||||||||||||||||| || ||| | |||
Sbjct 66 CTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGCGGCGATCTTGTCC 125
Query 140 TGCACATCGTAGTCGGATACGAATAGGCTTC-GGCCCCGAACCTTAGCAGGCCGGCAACG 198
|||||||||||||||||||||||||| | ||||| | | |||||| || |||| |||
Sbjct 126 CACACATCGTAGTCGGATACGAATAGGCCCCTGGCCCTGCATCTTAGCTGGTCGGCGACG 185
Query 199 GGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGG 258
||| ||||| ||| | ||||| || ||||||||| |||||||| ||
Sbjct 186 CTATCACCGTGGAAG-TCGGTGGTAGTAGCTGACGTCTTGCAATTTTACCATGCGTGGGA 244
Query 259 ATAAATCCTTTGCAGACGAC 278
||| | |||||| |||||
Sbjct 245 ATAGGACATTTGCATACGAC 264
>seq1379
Length=12095
Score = 205 bits (226), Expect = 2e-50
Identities = 126/132 (95%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||
Sbjct 139 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 82
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 81 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 22
Query 121 GAACGGGGTGAT 132
||||| || |||
Sbjct 21 GAACGCGGCGAT 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819186397696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |