Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq169 486 3e-135
>seq169
Length=8550
Score = 486 bits (538), Expect = 3e-135
Identities = 301/318 (95%), Gaps = 3/318 (1%)
Strand=Plus/Plus
Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCG 60
|||||| |||||||||||||| |||||||| || || |||||||||||||||| ||| |
Sbjct 2908 TACTTG-TCCGGCCGGGCCTT-CCTTCTGGAGAACCTCATGCCCTTCACTGGGCGTGTTG 2965
Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2966 GGGA-CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 3024
Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3025 ACGTTAGCATGGAATAATAGAATAGGACGTGCGGTCCTATTTTGTTGGTTTCTAGGACCG 3084
Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 3085 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 3144
Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300
||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 3145 TTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA 3204
Query 301 GTGAACGAAAGTTAGGGG 318
||||||||||||||||||
Sbjct 3205 GTGAACGAAAGTTAGGGG 3222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915195689408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |