Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq169 486 3e-135 >seq169 Length=8550 Score = 486 bits (538), Expect = 3e-135 Identities = 301/318 (95%), Gaps = 3/318 (1%) Strand=Plus/Plus Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCG 60 |||||| |||||||||||||| |||||||| || || |||||||||||||||| ||| | Sbjct 2908 TACTTG-TCCGGCCGGGCCTT-CCTTCTGGAGAACCTCATGCCCTTCACTGGGCGTGTTG 2965 Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 120 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2966 GGGA-CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAAT 3024 Query 121 ACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCG 180 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 3025 ACGTTAGCATGGAATAATAGAATAGGACGTGCGGTCCTATTTTGTTGGTTTCTAGGACCG 3084 Query 181 CCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTC 240 ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 3085 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 3144 Query 241 TTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 3145 TTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA 3204 Query 301 GTGAACGAAAGTTAGGGG 318 |||||||||||||||||| Sbjct 3205 GTGAACGAAAGTTAGGGG 3222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915195689408