Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq169 919 0.0
>seq169
Length=8550
Score = 919 bits (1018), Expect = 0.0
Identities = 607/667 (91%), Gaps = 5/667 (1%)
Strand=Plus/Plus
Query 19 GCCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGT 78
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4777 GCCGTGTAAAGCCCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGT 4836
Query 79 AAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 138
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 4837 AAATTTCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGA 4896
Query 139 AAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 4897 AAGATGAAAAGCACTTTGGAAAGAGAGTCAAATAGCACGTGAAATTGTTGAAAGGGAAGC 4956
Query 199 GCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTG 258
||||||| ||||||||||| | ||||||| | | || | | | || |||||||||||||
Sbjct 4957 GCTTGCAGCCAGACTTGCCTGTAGTTGCTTATCTGGACTTTTGTCCAGTGCACTCTTCTG 5016
Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
||| |||||||||||||| | ||||||| ||||||||| | | | |||| | || |||
Sbjct 5017 CGGGCAGGCCAGCATCAGTTTGGGCGGTTGGATAAAGGTCTCTGTCATGTACCTCCTTTC 5076
Query 319 GGGG-GGTGTTATAGCCCGGGGTGGA-ATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCG 376
|||| || |||||| || | || |||| || |||||||||||||||||||| |
Sbjct 5077 GGGGAGGCCTTATAG--GGGAGACGACATGCAACCAGCCTGGACTGAGGTCCGCGCATCT 5134
Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 5135 GCTAGGATGCTGGCGTAATGGCTGTAAGCGGCCCGTCTTGAAACACGGACCAAGGAGTCT 5194
Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG 496
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 5195 AACATCTATGCGAGTGTTTGGGTGTCAAGCCCAGACGCGTAATGAAAGTGAACGGAGGTG 5254
Query 497 GGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556
|||||| | | ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 5255 GGAACCTTTTA-GGTGCACCATCGACCGATCCTGATGTCTTCGGAAGGATTTGAGTAAGA 5313
Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 5314 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCTTGAATAGGGTGAAGCCAGAGGA 5373
Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 5374 AACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGCATA 5433
Query 677 GGGGCGA 683
|||||||
Sbjct 5434 GGGGCGA 5440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079989897050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |