Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq30 109 1e-21
>seq30
Length=86301
Score = 109 bits (120), Expect = 1e-21
Identities = 275/414 (66%), Gaps = 17/414 (4%)
Strand=Plus/Minus
Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74
|||||||| || ||| || |||||||||| | | |||||||| |||||| |
Sbjct 14226 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAACCATTGAGACAGCTGTTGCATCGTGAG 14167
Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134
||||| ||| | | | ||| | ||||| ||||||||||||||||||| ||||
Sbjct 14166 ATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCTTATA 14107
Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC---GTTAG----CTAACC 187
| || ||||||| || | |||| ||| |||| | || | |||| ||||
Sbjct 14106 GGTAAGGCCGCCATTAAATGGGGGTTCCTTCAAAACCTAGCCTATTTTAGTCGTCTAAGT 14047
Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247
||| |||||| || || |||||| | ||| |||||| | | || | | ||
Sbjct 14046 AAATCCGTTAACCAGCCATCATTGGGCAGATAGCGCACTCTATACTTTGATTTACATCTT 13987
Query 248 -TGCAGAGTGCTGTGTTTTTAATAAACAGTC--GCAGCGGCCTGGTATCTTCGACCGGCA 304
||||||||||||||||| | ||||||||| ||| | | | ||| | | |
Sbjct 13986 ACGCAGAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCTCCTCTTCC 13927
Query 305 TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGC 364
| | || | | || ||| | | ||| ||||||||||| ||||||||||
Sbjct 13926 TAAACTGA--TATTAA-----TCAGCAGGAATGGCACACCTTCTCCCTCAGTTACGGTGT 13874
Query 365 CTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418
| |||||| |||||||| ||| |||||| |||||| |||||||||||
Sbjct 13873 CAATTTGCCGAGTTCCTTAATGGTTGTTATCTCAAACGCCTTCGTATTCTCTAC 13820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260794061632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |