Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq30 109 1e-21 >seq30 Length=86301 Score = 109 bits (120), Expect = 1e-21 Identities = 275/414 (66%), Gaps = 17/414 (4%) Strand=Plus/Minus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||| || ||| || |||||||||| | | |||||||| |||||| | Sbjct 14226 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAACCATTGAGACAGCTGTTGCATCGTGAG 14167 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 ||||| ||| | | | ||| | ||||| ||||||||||||||||||| |||| Sbjct 14166 ATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCTTATA 14107 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC---GTTAG----CTAACC 187 | || ||||||| || | |||| ||| |||| | || | |||| |||| Sbjct 14106 GGTAAGGCCGCCATTAAATGGGGGTTCCTTCAAAACCTAGCCTATTTTAGTCGTCTAAGT 14047 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 ||| |||||| || || |||||| | ||| |||||| | | || | | || Sbjct 14046 AAATCCGTTAACCAGCCATCATTGGGCAGATAGCGCACTCTATACTTTGATTTACATCTT 13987 Query 248 -TGCAGAGTGCTGTGTTTTTAATAAACAGTC--GCAGCGGCCTGGTATCTTCGACCGGCA 304 ||||||||||||||||| | ||||||||| ||| | | | ||| | | | Sbjct 13986 ACGCAGAGTGCTGTGTTTTAATTAAACAGTCGTGCAACACCATTTTATGTCTCCTCTTCC 13927 Query 305 TGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGC 364 | | || | | || ||| | | ||| ||||||||||| |||||||||| Sbjct 13926 TAAACTGA--TATTAA-----TCAGCAGGAATGGCACACCTTCTCCCTCAGTTACGGTGT 13874 Query 365 CTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTAC 418 | |||||| |||||||| ||| |||||| |||||| ||||||||||| Sbjct 13873 CAATTTGCCGAGTTCCTTAATGGTTGTTATCTCAAACGCCTTCGTATTCTCTAC 13820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260794061632