Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq30 80.6 6e-13
>seq30
Length=86301
Score = 80.6 bits (88), Expect = 6e-13
Identities = 254/383 (66%), Gaps = 48/383 (13%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64
|||||||| | ||| || |||||| ||| | | ||||||||| ||| ||||
Sbjct 14226 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAACCATTGAGACAGCTGTTGC----ATCG 14171
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
| | | ||| |||| | | | ||| | ||||| ||||||||||||||||||| |
Sbjct 14170 TGAGATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCT 14111
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT-GC---TTCGATTGCTC 176
||||| || ||||||| || | ||||| || |||| || || || | | ||
Sbjct 14110 TATAGGTAAGGCCGCCATTAAATGGGGGTT-CCTTCAAAACCTAGCCTATTTTAGTCGTC 14052
Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAG---GCGTCAGCTCCTATACATCGTCT 233
||| | || |||||| ||| || |||||| ||| || || |||||| | | |
Sbjct 14051 TAAGTAAATCCGTTAACCAGCCATCATTGGGCAGATAGCG-CA-CT-CTATACTTTGATT 13995
Query 234 TGCGACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCC-------TAT-T 284
| | |||| ||||| ||||||||| |||||||||| || | ||| |
Sbjct 13994 TACATCTTACGCAGAGTGCTGTGTTTTAATTAAACAGTCG--TGCAACACCATTTTATGT 13937
Query 285 CTCTGCGGCCT---GTCATA-----------GACAGGCACCCCTTCTCCCTAAGTTACGG 330
||| | ||| | ||| || ||||| |||||||||| ||||||||
Sbjct 13936 CTCCTCTTCCTAAACTGATATTAATCAGCAGGAATGGCACACCTTCTCCCTCAGTTACGG 13877
Query 331 GGTCATTTTGCCGAGTTCCTTAA 353
|||| |||||||||||||||||
Sbjct 13876 TGTCAATTTGCCGAGTTCCTTAA 13854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062394996096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |