Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq30 80.6 6e-13 >seq30 Length=86301 Score = 80.6 bits (88), Expect = 6e-13 Identities = 254/383 (66%), Gaps = 48/383 (13%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAG----TGCCCAAATCG 64 |||||||| | ||| || |||||| ||| | | ||||||||| ||| |||| Sbjct 14226 ATCTTCACTGCCATTCCAGTTTCACTGAGCCAACCATTGAGACAGCTGTTGC----ATCG 14171 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 | | | ||| |||| | | | ||| | ||||| ||||||||||||||||||| | Sbjct 14170 TGAGATCATTCATGCGCGACATCATTTAAATGCCAAGGTATTTCGCTACCTTAGGACCCT 14111 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT-GC---TTCGATTGCTC 176 ||||| || ||||||| || | ||||| || |||| || || || | | || Sbjct 14110 TATAGGTAAGGCCGCCATTAAATGGGGGTT-CCTTCAAAACCTAGCCTATTTTAGTCGTC 14052 Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAG---GCGTCAGCTCCTATACATCGTCT 233 ||| | || |||||| ||| || |||||| ||| || || |||||| | | | Sbjct 14051 TAAGTAAATCCGTTAACCAGCCATCATTGGGCAGATAGCG-CA-CT-CTATACTTTGATT 13995 Query 234 TGCGACTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCC-------TAT-T 284 | | |||| ||||| ||||||||| |||||||||| || | ||| | Sbjct 13994 TACATCTTACGCAGAGTGCTGTGTTTTAATTAAACAGTCG--TGCAACACCATTTTATGT 13937 Query 285 CTCTGCGGCCT---GTCATA-----------GACAGGCACCCCTTCTCCCTAAGTTACGG 330 ||| | ||| | ||| || ||||| |||||||||| |||||||| Sbjct 13936 CTCCTCTTCCTAAACTGATATTAATCAGCAGGAATGGCACACCTTCTCCCTCAGTTACGG 13877 Query 331 GGTCATTTTGCCGAGTTCCTTAA 353 |||| ||||||||||||||||| Sbjct 13876 TGTCAATTTGCCGAGTTCCTTAA 13854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062394996096