Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq169 526 4e-147
seq37 77.0 6e-12
>seq169
Length=8550
Score = 526 bits (582), Expect = 4e-147
Identities = 302/309 (98%), Gaps = 0/309 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 3559 GAACGAGACCTTAACCTGCTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 3618
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3619 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 3678
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3679 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCTTCACCTTGGCCG 3738
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3739 AAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 3798
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3799 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCATGCGTTGATTACGTCCCTG 3858
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 3859 CCCTTTGTA 3867
>seq37
Length=77194
Score = 77.0 bits (84), Expect = 6e-12
Identities = 65/78 (83%), Gaps = 3/78 (4%)
Strand=Plus/Minus
Query 193 TTGGC-CGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
||||| || |||| |||||||||||||||||||||||||||||||| | |||||| |||
Sbjct 47123 TTGGCGCGCGAGGTTTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGAAAAGAGCACTGC 47064
Query 252 --AATTATTGCTCTTCAA 267
|||| ||| | ||||
Sbjct 47063 AGAATTGTTGTGCGTCAA 47046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947195538688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |