Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq465 396 2e-105 seq6 140 3e-28 >seq465 Length=132516 Score = 396 bits (438), Expect = 2e-105 Identities = 1247/1907 (65%), Gaps = 70/1907 (4%) Strand=Plus/Plus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||| ||||| | | || || ||| |||| | ||| ||||||||||||||| Sbjct 112111 TCGACGGTGAATTGGATGGGAGCAGAGGCGGCCATGGTACGAAGGTAGTACATGCCGGTC 112170 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 || | || ||| ||| | ||||||||| || | | || || | | | |||| Sbjct 112171 TTCAAACCGAGCTT-CCAGCCGGCGAAATGCATGGAAG-TGATCTTACCCATGGTGGGCT 112228 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || ||||| |||||| ||||||||| | ||| || || ||||||| Sbjct 112229 CCTTCATGTGGATGTTCAATGACTGAGATTGATCGATGAAGGCACCGCGGTCAGCAGCCA 112288 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTAC-CTCA 65314 | | ||||| ||| ||| || ||||| ||||||||||| ||| | | | ||| Sbjct 112289 TCTGGATGATGGTACGCTGCGAGATTTCCCATACGGTCTTGTAAAGG-GTCTTGGTCTCT 112347 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 ||| || | || ||||| ||||||| | |||||| || || || ||| Sbjct 112348 TCTGGGATGTTGGGGATCCTCTGGATGGAACCACCATCTGCAATGATACGGTTCTTCATG 112407 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGAC 65430 ||| ||||| | ||||| |||| || | | || ||||| | |||| ||| Sbjct 112408 TTCTCAGACCAGAGACCCATGTCGACGAGGTCCTTGAGGAGCCAAGGG----TTGACGAC 112463 Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490 |||||||| || | ||| |||||||| |||||||| || ||| || || ||| | Sbjct 112464 CTGGAACTCACCAGCCAGCACACGACGTGAGTAGATGTTCGAGGTGTATGGCTCGAAGCA 112523 Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550 || |||| || ||||| || | ||| || ||||| |||||||| || |||| | || Sbjct 112524 CTCGTTGTTTCCAAGAATCTGCGAAGTCGAGGCAGTAGGCATGGGCGCAACCAGGAGAGA 112583 Query 65551 GTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTT 65610 ||| |||| || | | | || |||| ||| |||||| ||| | | | Sbjct 112584 GTTGCGCACACCATGCTGAGCGATCTTGTCCTTCAACGAAGCCCAGTCCCAAA---GGTC 112640 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACTGGCCGGTG 65666 | | | || ||| ||| | ||| | || || || || || ||| | Sbjct 112641 A--GAAGGAGTC-ACGCCCCAGAGATCGTACTGAAGCTGACCCTTGGACACAGGC----G 112693 Query 65667 AACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTG 65726 |||| | | || | || || ||||||||| | | ||| | | ||| | Sbjct 112694 AACCCTCGTATGTAGCATATGGACCAAGCTCCTTGGCGATATCGCAGGACGACGTGAGAG 112753 Query 65727 CGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGCCTCA-TCGCTCTC 65784 | || ||||| |||||||| || | || || ||| | || ||| ||| ||| Sbjct 112754 CCGCGTGGTAAATTGTCTCGAAGATCTGGGTGTTGAGCTTCTTG-GCTTCAGTCGA-CTC 112811 Query 65785 GTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGG 65844 | |||| || | || |||| || || ||||| ||||| |||| ||||||||| Sbjct 112812 AAAAGGCAGACGAAGGGCGAGGAAAGCATCAGCAAGACCCTGAACACCAAGACCGATGGG 112871 Query 65845 ACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAAT 65904 | ||| || |||||| || | ||||| |||||||||| |||| ||||| || Sbjct 112872 CCTATGGCGGAAATTGCTGCGGCGTGCCTCCTCCACAGGGTAGTGGTTGACCTCGATGAT 112931 Query 65905 GCGATTCAAATTGCGTGTCACCAC-ATGCACGATACGTCGCAATTGTTCGAAATCAAAAT 65963 || | || ||||| || || ||| | ||| | |||| ||| || || | Sbjct 112932 CTTGTTGAGGTTACGTGTGACGACCATGGTCACCTCGTGGAGCTTGTG-GAAGTCGAACT 112990 Query 65964 GTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGT 66023 | || | | ||| | ||||| |||||||| || || || |||| Sbjct 112991 CGCCA---CGCTTGT-AGT--------CGACAAAGGATGGAAGGGCGAGGGAAGCCAGGT 113038 Query 66024 TGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGC 66083 |||| || || | ||| |||||||| || |||||||||| || ||||| || || || Sbjct 113039 TGCACACGGCGACCTCATCAGGAGCAGTGAACTCGACAATCTCAGTGCAGAGGTTGGAGC 113098 Query 66084 AGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCA 66143 ||| ||||| || | |||| || || ||| | ||||| || |||||||||| || Sbjct 113099 TGCGAATGGTACCGAGGTTCTTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACAGCA 113158 Query 66144 TGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT 66203 || |||| |||| |||||| || | ||| | ||||||| ||| || || Sbjct 113159 TGAACGGGTTGCCAGTCTCAGTCTGCGCCTCGAGAATGGCGTACCAGAG---------CT 113209 Query 66204 TCACCGTACGTACCGCC---CTACCTTTG------CGTTCGTAATGTTCGTAGAGGTGTT 66254 || | ||| || | | | ||| ||| || |||||| | |||||| | | Sbjct 113210 TCTGGGCACGAACAGTCTCGCGACCCTTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCT 113269 Query 66255 CGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACC 66314 |||| || || | || |||| |||| || |||| || || ||||| || | || Sbjct 113270 CGAACTCATCGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGTGTCC 113329 Query 66315 AATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGA 66374 | || || | || || || || ||| || ||||| || ||||||||||||||||||| Sbjct 113330 ACTCGCCGTTCTCTTGCACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGA 113389 Query 66375 GATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434 | || || |||||| ||| || | ||||| || ||||| | ||| ||||| | || | Sbjct 113390 GGTCACGAGCTCGTACCTCTTCCTTACCGTGGTTCTTGCGTAGGTCAAGGAAGCCGAATA 113449 Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494 || || |||||||| || |||||||||||||| | || || ||| |||||| | Sbjct 113450 CATCCGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCCT 113509 Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554 | ||||||||||||||| |||||| ||||||| | |||||| | ||| || || ||| Sbjct 113510 GATCGACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGGATG 113569 Query 66555 TGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAA 66614 | || |||||||| | ||| ||| || || || || ||| ||||| || |||| Sbjct 113570 TTCCGTTGGTGCCACCAATGTAGGAGCCGGTGGCACGGATGCGGTGCACATTGAGTCCAA 113629 Query 66615 TACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTC 66672 | || || || ||||| ||||| || | || || | || ||| | | || ||||| Sbjct 113630 TGCCGCCAGCGGTCTTGGAGAT--CAACGCACACGTCTTCAGTGTGTCGTAGATACCGTC 113687 Query 66673 AATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGC 66732 ||| ||| |||| ||| | |||| |||| || | || || ||||| || | Sbjct 113688 GATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCC 113747 Query 66733 GGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGT 66792 || ||| || || || | || || || ||||| | | |||||||| | ||| || Sbjct 113748 CGCGTTGAACAGCGTAGGCGAGGCATGTGTGAAGTACTTTTGCGACATGTAGTCGTAGGT 113807 Query 66793 CTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGT 66851 ||| ||| | ||||||| ||||||||| || || | || ||| ||||| || | || Sbjct 113808 CTCAATGGCCTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACA-CGCATGAGCATGT 113866 Query 66852 ATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCT 66911 || || || || | | | | ||||| | | | ||| ||||| || || |||| Sbjct 113867 GCTGTGGGCGCTCTGCAACCTTGCCGTTGATGCGGAGGAGGTATGAGCGCTCTAGCGTCT 113926 Query 66912 TGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 ||| |||||| || ||| ||||| ||| ||| || |||||| Sbjct 113927 TGAAGCCAAAGAACTGGTAGTTGAAGTCGCGGTCATATACAATGGCC 113973 >seq6 Length=114070 Score = 140 bits (154), Expect = 3e-28 Identities = 211/294 (72%), Gaps = 7/294 (2%) Strand=Plus/Plus Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149 |||| |||||||| ||||| |||||||| |||||||| | |||||| | ||| ||||| Sbjct 14780 TGGCAAATGTACAAGAAGGCCGAAGCTTCTTTCTGGACCGCCGAGGAGATTGATCTGTCC 14839 Query 61150 AAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACA 61205 || || | | |||||| | ||| | | ||| || || | ||||| || Sbjct 14840 AAGGATCTCCACGACTGGAACAAGCGCCTCAACGA-CGACGAGCGTTTCTTCATCTCCCA 14898 Query 61206 TGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTT 61265 || | || ||||| ||||| || || || |||||||| ||||| | | || || || Sbjct 14899 CGTTCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTCAACGAGAACCTCGTCGAGCGCTT 14958 Query 61266 CGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGG 61324 | | ||| ||||| ||| | | ||||| || || |||||||||||||||||| |||| Sbjct 14959 CTC-CAGCGAGGTTCAAATACCAGAGGCACGATGCTTCTACGGCTTCCAGATTATGATGG 15017 Query 61325 AGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378 |||| ||||||| |||| ||| | |||||||| || |||||||| |||| Sbjct 15018 AGAACATCCACTCAGAGACATACTCGCTCCTCATCGACACATACATCAGCGAGC 15071 Score = 102 bits (112), Expect = 6e-17 Identities = 329/504 (65%), Gaps = 15/504 (3%) Strand=Plus/Plus Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGA 61491 ||| || || ||||| |||| |||||| | || |||| || || |||| | || Sbjct 15177 GAAGGCCGACTGGGCTCTCAAGTGGATCTC-AG-ACAAGAACTCCACTTTTGCCAACCGT 15234 Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551 | | || ||||| | || |||||| | || ||||| || || || || | ||||| Sbjct 15235 CTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCTCTTTCGCGTCCATCTTC 15294 Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611 ||| | ||||| || || || ||||| ||||| |||||| ||| ||| | || || || Sbjct 15295 TGGCTCAAGAAGCGCGGTCTGATGCCAGGTCTTACCTTCTCCAACGAGCTCATCTCCCGT 15354 Query 61612 GACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGT 61671 |||||||||||||| || ||||| |||| || || ||| | || | Sbjct 15355 GACGAGGGCATGCACACCGACTTTGCATGCCTGCTCTT------CTCTCTTCTCAA-CAC 15407 Query 61672 CCGTCGGAG-GAGCGTGTGGGTGAG---ATTGTTCGTGAGGCGGTAACTATCGAACAGGA 61727 ||| | || || || | || || | ||||| || || || ||||| Sbjct 15408 CCGCCCCAGCAAGGATGCCGTCAAGGCCATCATCACCGAGGCTGTTGAGATTGAGCAGGA 15467 Query 61728 ATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCA 61787 || || || || ||| | ||| | | || |||||||||||| || |||| || Sbjct 15468 GTTCCTCACCGAAGCTCTCCCCTGCGCTCTGCTCGGCATGAATTCCACCCTCATGTGCCA 15527 Query 61788 GTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAA 61847 ||| || || || || || ||||| ||| || | | | || | | | |||| || Sbjct 15528 GTACATCGAGTTCGTCGCTGACCGCCTGCTGTTGGCCCTTGGCAACACCAAGGTCTACAA 15587 Query 61848 TACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907 | | ||||| || || |||||||| | || ||||| | |||||||| || || || Sbjct 15588 CGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCGCGGGCAAGACCAACTTCTT 15647 Query 61908 CGAGAAACGTGTAGGCGACTATCA 61931 |||||| || || ||||| || || Sbjct 15648 CGAGAAGCGCGTCGGCGATTACCA 15671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565717835440