Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq465 396 2e-105
seq6 140 3e-28
>seq465
Length=132516
Score = 396 bits (438), Expect = 2e-105
Identities = 1247/1907 (65%), Gaps = 70/1907 (4%)
Strand=Plus/Plus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||| ||||| | | || || ||| |||| | ||| |||||||||||||||
Sbjct 112111 TCGACGGTGAATTGGATGGGAGCAGAGGCGGCCATGGTACGAAGGTAGTACATGCCGGTC 112170
Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
|| | || ||| ||| | ||||||||| || | | || || | | | ||||
Sbjct 112171 TTCAAACCGAGCTT-CCAGCCGGCGAAATGCATGGAAG-TGATCTTACCCATGGTGGGCT 112228
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || ||||| |||||| ||||||||| | ||| || || |||||||
Sbjct 112229 CCTTCATGTGGATGTTCAATGACTGAGATTGATCGATGAAGGCACCGCGGTCAGCAGCCA 112288
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTAC-CTCA 65314
| | ||||| ||| ||| || ||||| ||||||||||| ||| | | | |||
Sbjct 112289 TCTGGATGATGGTACGCTGCGAGATTTCCCATACGGTCTTGTAAAGG-GTCTTGGTCTCT 112347
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
||| || | || ||||| ||||||| | |||||| || || || |||
Sbjct 112348 TCTGGGATGTTGGGGATCCTCTGGATGGAACCACCATCTGCAATGATACGGTTCTTCATG 112407
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTT----GAACCAAGTGACGATTGATGAC 65430
||| ||||| | ||||| |||| || | | || ||||| | |||| |||
Sbjct 112408 TTCTCAGACCAGAGACCCATGTCGACGAGGTCCTTGAGGAGCCAAGGG----TTGACGAC 112463
Query 65431 TTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGA 65490
|||||||| || | ||| |||||||| |||||||| || ||| || || ||| |
Sbjct 112464 CTGGAACTCACCAGCCAGCACACGACGTGAGTAGATGTTCGAGGTGTATGGCTCGAAGCA 112523
Query 65491 TTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGA 65550
|| |||| || ||||| || | ||| || ||||| |||||||| || |||| | ||
Sbjct 112524 CTCGTTGTTTCCAAGAATCTGCGAAGTCGAGGCAGTAGGCATGGGCGCAACCAGGAGAGA 112583
Query 65551 GTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTT 65610
||| |||| || | | | || |||| ||| |||||| ||| | | |
Sbjct 112584 GTTGCGCACACCATGCTGAGCGATCTTGTCCTTCAACGAAGCCCAGTCCCAAA---GGTC 112640
Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATACTGGCCGGTG 65666
| | | || ||| ||| | ||| | || || || || || ||| |
Sbjct 112641 A--GAAGGAGTC-ACGCCCCAGAGATCGTACTGAAGCTGACCCTTGGACACAGGC----G 112693
Query 65667 AACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTG 65726
|||| | | || | || || ||||||||| | | ||| | | ||| |
Sbjct 112694 AACCCTCGTATGTAGCATATGGACCAAGCTCCTTGGCGATATCGCAGGACGACGTGAGAG 112753
Query 65727 CGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAG-TTCACGTGCCTCA-TCGCTCTC 65784
| || ||||| |||||||| || | || || ||| | || ||| ||| |||
Sbjct 112754 CCGCGTGGTAAATTGTCTCGAAGATCTGGGTGTTGAGCTTCTTG-GCTTCAGTCGA-CTC 112811
Query 65785 GTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGG 65844
| |||| || | || |||| || || ||||| ||||| |||| |||||||||
Sbjct 112812 AAAAGGCAGACGAAGGGCGAGGAAAGCATCAGCAAGACCCTGAACACCAAGACCGATGGG 112871
Query 65845 ACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAAT 65904
| ||| || |||||| || | ||||| |||||||||| |||| ||||| ||
Sbjct 112872 CCTATGGCGGAAATTGCTGCGGCGTGCCTCCTCCACAGGGTAGTGGTTGACCTCGATGAT 112931
Query 65905 GCGATTCAAATTGCGTGTCACCAC-ATGCACGATACGTCGCAATTGTTCGAAATCAAAAT 65963
|| | || ||||| || || ||| | ||| | |||| ||| || || |
Sbjct 112932 CTTGTTGAGGTTACGTGTGACGACCATGGTCACCTCGTGGAGCTTGTG-GAAGTCGAACT 112990
Query 65964 GTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGT 66023
| || | | ||| | ||||| |||||||| || || || ||||
Sbjct 112991 CGCCA---CGCTTGT-AGT--------CGACAAAGGATGGAAGGGCGAGGGAAGCCAGGT 113038
Query 66024 TGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGC 66083
|||| || || | ||| |||||||| || |||||||||| || ||||| || || ||
Sbjct 113039 TGCACACGGCGACCTCATCAGGAGCAGTGAACTCGACAATCTCAGTGCAGAGGTTGGAGC 113098
Query 66084 AGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCA 66143
||| ||||| || | |||| || || ||| | ||||| || |||||||||| ||
Sbjct 113099 TGCGAATGGTACCGAGGTTCTTCTGGTTGGACTTCCTGTTGCAAGCGTCCTTGTACAGCA 113158
Query 66144 TGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT 66203
|| |||| |||| |||||| || | ||| | ||||||| ||| || ||
Sbjct 113159 TGAACGGGTTGCCAGTCTCAGTCTGCGCCTCGAGAATGGCGTACCAGAG---------CT 113209
Query 66204 TCACCGTACGTACCGCC---CTACCTTTG------CGTTCGTAATGTTCGTAGAGGTGTT 66254
|| | ||| || | | | ||| ||| || |||||| | |||||| | |
Sbjct 113210 TCTGGGCACGAACAGTCTCGCGACCCTTGTTCTCGCGCTCGTAACGGGTGTAGAGCTCCT 113269
Query 66255 CGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACC 66314
|||| || || | || |||| |||| || |||| || || ||||| || | ||
Sbjct 113270 CGAACTCATCGCCGTAGACGTCGGCAAGACCAGGGCACTCGTTGGGGCACATGAGTGTCC 113329
Query 66315 AATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGA 66374
| || || | || || || || ||| || ||||| || |||||||||||||||||||
Sbjct 113330 ACTCGCCGTTCTCTTGCACTCGCTTCATGAAGAGATCGGGAATCCAGAGGGCGTAGAAGA 113389
Query 66375 GATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434
| || || |||||| ||| || | ||||| || ||||| | ||| ||||| | || |
Sbjct 113390 GGTCACGAGCTCGTACCTCTTCCTTACCGTGGTTCTTGCGTAGGTCAAGGAAGCCGAATA 113449
Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494
|| || |||||||| || |||||||||||||| | || || ||| |||||| |
Sbjct 113450 CATCCGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCCT 113509
Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554
| ||||||||||||||| |||||| ||||||| | |||||| | ||| || || |||
Sbjct 113510 GATCGACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATCGGGATGAGACCATTGGATG 113569
Query 66555 TGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAA 66614
| || |||||||| | ||| ||| || || || || ||| ||||| || ||||
Sbjct 113570 TTCCGTTGGTGCCACCAATGTAGGAGCCGGTGGCACGGATGCGGTGCACATTGAGTCCAA 113629
Query 66615 TACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGCCGTC 66672
| || || || ||||| ||||| || | || || | || ||| | | || |||||
Sbjct 113630 TGCCGCCAGCGGTCTTGGAGAT--CAACGCACACGTCTTCAGTGTGTCGTAGATACCGTC 113687
Query 66673 AATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGC 66732
||| ||| |||| ||| | |||| |||| || | || || ||||| || |
Sbjct 113688 GATGCTGTCCTCCTTCATGTCGATGAGGAAGCAGGATGACATCTGAGGGTTGGGCGTTCC 113747
Query 66733 GGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGT 66792
|| ||| || || || | || || || ||||| | | |||||||| | ||| ||
Sbjct 113748 CGCGTTGAACAGCGTAGGCGAGGCATGTGTGAAGTACTTTTGCGACATGTAGTCGTAGGT 113807
Query 66793 CTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGT 66851
||| ||| | ||||||| ||||||||| || || | || ||| ||||| || | ||
Sbjct 113808 CTCAATGGCCTTCTCAATGTCTTCGCCATGGATGCCAACGGCGACA-CGCATGAGCATGT 113866
Query 66852 ATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCT 66911
|| || || || | | | | ||||| | | | ||| ||||| || || ||||
Sbjct 113867 GCTGTGGGCGCTCTGCAACCTTGCCGTTGATGCGGAGGAGGTATGAGCGCTCTAGCGTCT 113926
Query 66912 TGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958
||| |||||| || ||| ||||| ||| ||| || ||||||
Sbjct 113927 TGAAGCCAAAGAACTGGTAGTTGAAGTCGCGGTCATATACAATGGCC 113973
>seq6
Length=114070
Score = 140 bits (154), Expect = 3e-28
Identities = 211/294 (72%), Gaps = 7/294 (2%)
Strand=Plus/Plus
Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149
|||| |||||||| ||||| |||||||| |||||||| | |||||| | ||| |||||
Sbjct 14780 TGGCAAATGTACAAGAAGGCCGAAGCTTCTTTCTGGACCGCCGAGGAGATTGATCTGTCC 14839
Query 61150 AAAGACATGAATGACTGGGA---GCGTTT-ATCGAGCGGTGAACAACATTTCATTAAACA 61205
|| || | | |||||| | ||| | | ||| || || | ||||| ||
Sbjct 14840 AAGGATCTCCACGACTGGAACAAGCGCCTCAACGA-CGACGAGCGTTTCTTCATCTCCCA 14898
Query 61206 TGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTT 61265
|| | || ||||| ||||| || || || |||||||| ||||| | | || || ||
Sbjct 14899 CGTTCTCGCCTTCTTCGCCGCCTCCGATGGCATCGTCAACGAGAACCTCGTCGAGCGCTT 14958
Query 61266 CGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGG 61324
| | ||| ||||| ||| | | ||||| || || |||||||||||||||||| ||||
Sbjct 14959 CTC-CAGCGAGGTTCAAATACCAGAGGCACGATGCTTCTACGGCTTCCAGATTATGATGG 15017
Query 61325 AGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
|||| ||||||| |||| ||| | |||||||| || |||||||| ||||
Sbjct 15018 AGAACATCCACTCAGAGACATACTCGCTCCTCATCGACACATACATCAGCGAGC 15071
Score = 102 bits (112), Expect = 6e-17
Identities = 329/504 (65%), Gaps = 15/504 (3%)
Strand=Plus/Plus
Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGA 61491
||| || || ||||| |||| |||||| | || |||| || || |||| | ||
Sbjct 15177 GAAGGCCGACTGGGCTCTCAAGTGGATCTC-AG-ACAAGAACTCCACTTTTGCCAACCGT 15234
Query 61492 TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTT 61551
| | || ||||| | || |||||| | || ||||| || || || || | |||||
Sbjct 15235 CTCGTCGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGCTCTTTCGCGTCCATCTTC 15294
Query 61552 TGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGC 61611
||| | ||||| || || || ||||| ||||| |||||| ||| ||| | || || ||
Sbjct 15295 TGGCTCAAGAAGCGCGGTCTGATGCCAGGTCTTACCTTCTCCAACGAGCTCATCTCCCGT 15354
Query 61612 GACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGT 61671
|||||||||||||| || ||||| |||| || || ||| | || |
Sbjct 15355 GACGAGGGCATGCACACCGACTTTGCATGCCTGCTCTT------CTCTCTTCTCAA-CAC 15407
Query 61672 CCGTCGGAG-GAGCGTGTGGGTGAG---ATTGTTCGTGAGGCGGTAACTATCGAACAGGA 61727
||| | || || || | || || | ||||| || || || |||||
Sbjct 15408 CCGCCCCAGCAAGGATGCCGTCAAGGCCATCATCACCGAGGCTGTTGAGATTGAGCAGGA 15467
Query 61728 ATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCA 61787
|| || || || ||| | ||| | | || |||||||||||| || |||| ||
Sbjct 15468 GTTCCTCACCGAAGCTCTCCCCTGCGCTCTGCTCGGCATGAATTCCACCCTCATGTGCCA 15527
Query 61788 GTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAA 61847
||| || || || || || ||||| ||| || | | | || | | | |||| ||
Sbjct 15528 GTACATCGAGTTCGTCGCTGACCGCCTGCTGTTGGCCCTTGGCAACACCAAGGTCTACAA 15587
Query 61848 TACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907
| | ||||| || || |||||||| | || ||||| | |||||||| || || ||
Sbjct 15588 CGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTCGCGGGCAAGACCAACTTCTT 15647
Query 61908 CGAGAAACGTGTAGGCGACTATCA 61931
|||||| || || ||||| || ||
Sbjct 15648 CGAGAAGCGCGTCGGCGATTACCA 15671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397565717835440
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