Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27] 471 sequences; 36,473,783 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq322 91.5 6e-13 seq90 91.5 6e-13 >seq322 Length=270006 Score = 91.5 bits (100), Expect = 6e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 349056 TCTTCATCTTGGGCGTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGT 349115 |||| || |||| || | || |||||| ||||| || | || | || || || |||| Sbjct 73791 TCTTGATGTTGGCCGCGATGTTGAGAATTTCCTTAAGACGTGGTACACCAAGAGTGACGT 73850 Query 349116 TCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGC 349175 |||||| || || || ||||| |||||||| | || |||| || || ||||| | Sbjct 73851 TCTTGGACGACACACCAGCAAAATGGAAGGTGTTTAGCGTCATTTGAGTAGCAGGCTCAC 73910 Query 349176 CGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGGCGC 349218 | ||| |||| | ||||||| || ||||||||||| ||||| Sbjct 73911 CAATGGACTGAGCAGCGAGGACACCAACCATCTCGCCCGGCGC 73953 >seq90 Length=398350 Score = 91.5 bits (100), Expect = 6e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 449005 GGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGC 449064 ||||||||| || ||| || | || |||||||||||||||||||| | ||| | Sbjct 263870 GGTCATGCGTGAGGGGAAGCCGTGGGGGTTCATGATGATGTCGGGGTTGATGCCTTGGTC 263929 Query 449065 GTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG 449124 ||||||||||||||| || | | ||| | |||||| || |||||| |||||||| || Sbjct 263930 GTTGAAGGGCATGTCTTCTTGCTGGACGATGAGGCCGGTGGTGCCCTTTTGGCCGTGACG 263989 Query 449125 GCTGCAGAACTTGTCCCC 449142 | |||| ||||| || Sbjct 263990 CGAGGAGAATTTGTCGCC 264007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084726312402858