Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20laetus_20[genbank_20GCA_5F001414375.1_202015-10-27]
471 sequences; 36,473,783 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq322 91.5 6e-13
seq90 91.5 6e-13
>seq322
Length=270006
Score = 91.5 bits (100), Expect = 6e-13
Identities = 118/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 349056 TCTTCATCTTGGGCGTGGCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGT 349115
|||| || |||| || | || |||||| ||||| || | || | || || || ||||
Sbjct 73791 TCTTGATGTTGGCCGCGATGTTGAGAATTTCCTTAAGACGTGGTACACCAAGAGTGACGT 73850
Query 349116 TCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGC 349175
|||||| || || || ||||| |||||||| | || |||| || || ||||| |
Sbjct 73851 TCTTGGACGACACACCAGCAAAATGGAAGGTGTTTAGCGTCATTTGAGTAGCAGGCTCAC 73910
Query 349176 CGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCGGGCGC 349218
| ||| |||| | ||||||| || ||||||||||| |||||
Sbjct 73911 CAATGGACTGAGCAGCGAGGACACCAACCATCTCGCCCGGCGC 73953
>seq90
Length=398350
Score = 91.5 bits (100), Expect = 6e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 449005 GGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGC 449064
||||||||| || ||| || | || |||||||||||||||||||| | ||| |
Sbjct 263870 GGTCATGCGTGAGGGGAAGCCGTGGGGGTTCATGATGATGTCGGGGTTGATGCCTTGGTC 263929
Query 449065 GTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCG 449124
||||||||||||||| || | | ||| | |||||| || |||||| |||||||| ||
Sbjct 263930 GTTGAAGGGCATGTCTTCTTGCTGGACGATGAGGCCGGTGGTGCCCTTTTGGCCGTGACG 263989
Query 449125 GCTGCAGAACTTGTCCCC 449142
| |||| ||||| ||
Sbjct 263990 CGAGGAGAATTTGTCGCC 264007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084726312402858
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |