Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq234 509 3e-142 >seq234 Length=7663 Score = 509 bits (564), Expect = 3e-142 Identities = 302/315 (96%), Gaps = 0/315 (0%) Strand=Plus/Plus Query 4 TTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG 63 |||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 2281 TTGGTCCGGCCGGGTCTTTCCTTCTGGGGAGCCGCATGCCCTTCACTGGGTGTGCTGGGG 2340 Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123 | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2341 AACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACA 2400 Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2401 TTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 2460 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 2461 TAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTG 2520 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 2521 GATCTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTG 2580 Query 304 AACGAAAGTTAGGGG 318 ||||||||||||||| Sbjct 2581 AACGAAAGTTAGGGG 2595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915191534400