Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq234 899 0.0
>seq234
Length=7663
Score = 899 bits (996), Expect = 0.0
Identities = 600/665 (90%), Gaps = 2/665 (0%)
Strand=Plus/Plus
Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79
|||||| |||||| |||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 4113 CCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAATTGGGTGGTA 4172
Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139
|||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 4173 AATTTCATCTAAAGCTAAATATATGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 4232
Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 4233 AGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCG 4292
Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAA-CCGGCCCCTCGGCCGGTGCACTCTTCTG 258
||||| |||||||| | ||| | || |||| |||| ||| | || |||||| | |
Sbjct 4293 CTTGCGACCAGACTCGGGCGCCGCTGATCAATCCGGGTTCTCC-CGGGGGCACTCGGCGG 4351
Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318
|| |||||||||| | || || || ||||||||||| |||||||| || |||||
Sbjct 4352 CGTCTGGGCCAGCATCGGTTCTGGTGGCTGGATAAAGGCCTTGGGAATGTAGCTTCCTTC 4411
Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378
|||| |||||||||||| |||| ||||| |||| || |||| |||| ||||||| ||||
Sbjct 4412 GGGGAGTGTTATAGCCCTCGGTGCAATGCAGCCCACCGGGACCGAGGACCGCGCTTCGGC 4471
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
|||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||
Sbjct 4472 TAGGATGCTGGCGTAATGGTCGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 4531
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
|||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||| |
Sbjct 4532 CATCTATGCGAGTGTTTGGGTGTCAAACCCATGCGCGAAATGAAAGTGAACGTAGGTGAG 4591
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
||||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 4592 AACCCGTCCGGGTGCATCATCGACCGATCCTGAAGTCTTCGGATGGATTTGAGTAAGAGC 4651
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 4652 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTAAATAGGGTGAAGCCAGAGGAAA 4711
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4712 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 4771
Query 679 GGCGA 683
|||||
Sbjct 4772 GGCGA 4776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079980158750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |