Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq234 899 0.0 >seq234 Length=7663 Score = 899 bits (996), Expect = 0.0 Identities = 600/665 (90%), Gaps = 2/665 (0%) Strand=Plus/Plus Query 20 CCGTGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTA 79 |||||| |||||| |||||||||||||||||||||||||||||||||||| |||| |||| Sbjct 4113 CCGTGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAATTGGGTGGTA 4172 Query 80 AATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 4173 AATTTCATCTAAAGCTAAATATATGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 4232 Query 140 AGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 4233 AGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCG 4292 Query 200 CTTGCAACCAGACTTGCCCGCAGTTGCTCAA-CCGGCCCCTCGGCCGGTGCACTCTTCTG 258 ||||| |||||||| | ||| | || |||| |||| ||| | || |||||| | | Sbjct 4293 CTTGCGACCAGACTCGGGCGCCGCTGATCAATCCGGGTTCTCC-CGGGGGCACTCGGCGG 4351 Query 259 CGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTC 318 || |||||||||| | || || || ||||||||||| |||||||| || ||||| Sbjct 4352 CGTCTGGGCCAGCATCGGTTCTGGTGGCTGGATAAAGGCCTTGGGAATGTAGCTTCCTTC 4411 Query 319 GGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGC 378 |||| |||||||||||| |||| ||||| |||| || |||| |||| ||||||| |||| Sbjct 4412 GGGGAGTGTTATAGCCCTCGGTGCAATGCAGCCCACCGGGACCGAGGACCGCGCTTCGGC 4471 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| Sbjct 4472 TAGGATGCTGGCGTAATGGTCGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 4531 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 |||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||| | Sbjct 4532 CATCTATGCGAGTGTTTGGGTGTCAAACCCATGCGCGAAATGAAAGTGAACGTAGGTGAG 4591 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 ||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct 4592 AACCCGTCCGGGTGCATCATCGACCGATCCTGAAGTCTTCGGATGGATTTGAGTAAGAGC 4651 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 4652 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTAAATAGGGTGAAGCCAGAGGAAA 4711 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 4712 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 4771 Query 679 GGCGA 683 ||||| Sbjct 4772 GGCGA 4776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079980158750