Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq123 78.8 2e-12
>seq123
Length=40638
Score = 78.8 bits (86), Expect = 2e-12
Identities = 105/146 (72%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | ||| ||||||||| ||| | || ||||||||| |||||||
Sbjct 30180 ATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTTAA 30121
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
| ||| ||| | | | | ||| | | ||||| ||| ||||||||||||||| |||||
Sbjct 30120 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTTATA 30061
Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154
| || ||||||| || | |||| ||
Sbjct 30060 GATAAGGCCGCCATTGATCGGGGTTT 30035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062390172800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |