Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq123 78.8 2e-12 >seq123 Length=40638 Score = 78.8 bits (86), Expect = 2e-12 Identities = 105/146 (72%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||| | || ||||||||| ||||||| Sbjct 30180 ATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTTAA 30121 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||| ||||||||||||||| ||||| Sbjct 30120 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTTATA 30061 Query 129 GTTACGGCCGCCGTTTACTGGGGCTT 154 | || ||||||| || | |||| || Sbjct 30060 GATAAGGCCGCCATTGATCGGGGTTT 30035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062390172800