Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10-
27] 925 sequences; 42,813,648 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq123 89.7 2e-15
>seq123
Length=40638
Score = 89.7 bits (98), Expect = 2e-15
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355
||||| | | ||| |||||||| || || | ||||||| | |||||| ||| |
Sbjct 21148 GGGACCAAGACAAGTCATCATGGCCTAAATATTGTGGGCTATAGACGTGCCACATATTCC 21207
Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415
||||||| | |||||| | || | ||| |||| ||||||| | | | |
Sbjct 21208 TATACAAAATGATGCGAAAATGTGAATTTTAGCTAATCTAATAAAGTAGGATATAATAAG 21267
Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT 475
|||||||||||| || ||||||| ||||| ||||| ||||||||||| |||| ||
Sbjct 21268 GATTGTAGTCTGAAATTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCAC 21327
Query 476 GCTACGGTGAAT 487
| |||||||||
Sbjct 21328 GTCACGGTGAAT 21339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503986088000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |