Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20repandus_20[genbank_20GCA_5F001414415.1_202015-10- 27] 925 sequences; 42,813,648 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq234 515 7e-144 seq175 185 1e-44 >seq234 Length=7663 Score = 515 bits (570), Expect = 7e-144 Identities = 291/295 (99%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 6864 TACTAAGCTGAATTACCATTGCGGTGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 6805 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6804 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 6745 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6744 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 6685 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6684 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 6625 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6624 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 6570 >seq175 Length=20380 Score = 185 bits (204), Expect = 1e-44 Identities = 106/107 (99%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 189 GGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTC 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7621 GGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTC 7680 Query 249 GAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 7681 GAGGGACTAAAGGATCGATAGGCCACACTTT-ATGGTTTGTATTCAC 7726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854392096800