Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq74 194 9e-48
seq1091 104 1e-20
>seq74
Length=30834
Score = 194 bits (214), Expect = 9e-48
Identities = 113/117 (97%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 20542 GAACCCAAAGACTTTGATTTCTCGTAAGATGCCGAGCGAGTCAAAAAGATAACATCGCCC 20601
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 20602 GATCTCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 20658
>seq1091
Length=12727
Score = 104 bits (114), Expect = 1e-20
Identities = 62/65 (95%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 17 ATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCAT 76
|||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 6406 ATTTCTCGTAAGATGCCGAGCGAGTCAAAAAGATAACATCGCCCGATCTCTAGTCGGCAT 6465
Query 77 AGTTT 81
|||||
Sbjct 6466 AGTTT 6470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278374555110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |