Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq74 453 2e-125
>seq74
Length=30834
Score = 453 bits (502), Expect = 2e-125
Identities = 289/314 (92%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|| |||| |||||||||||||||| |||| || |||||| |||| | |||||| |||||
Sbjct 20973 TGATCCGACCGGGCCTTTCCTTCTAGGGAACCCCATGCCTTTCATTAGGTGTGTGGGGGA 20914
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 20913 ACTAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 20854
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 20853 TAGCATGGAATAATGAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 20794
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 20793 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCCGTTGTCAGAGGTGAAATTCTTGG 20734
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||| |||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 20733 ATTTACGGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 20674
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 20673 ACGAAAGTTAGGGG 20660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915110777152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |