Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq74 939 0.0
seq2176 111 7e-22
>seq74
Length=30834
Score = 939 bits (1040), Expect = 0.0
Identities = 607/662 (92%), Gaps = 2/662 (0%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 19137 TGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTATAT 19078
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 19077 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 19018
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 19017 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 18958
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTC-GGCCGGTGCACTCTTCTGCGG 261
|||||||||||||||||| |||| ||| || ||| || || ||||||||| | | ||
Sbjct 18957 GCAACCAGACTTGCCCGCCGTTGATCATCCT-CCCTTCTGGGTGGTGCACTCAGCGGTGG 18899
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
||||||||||||| | | || ||| ||||||||||| ||||| || || || |||||
Sbjct 18898 TCAGGCCAGCATCGGTTTTGGTGGTGGGATAAAGGCCTTGGGAACGTAGCTCCTCTCGGG 18839
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| |||||||||||| |||| ||||| ||| || |||| |||| ||||||| |||||||
Sbjct 18838 GAGTGTTATAGCCCTCGGTGCAATGCCGCCTACCGGGACCGAGGACCGCGCTTCGGCTAG 18779
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 18778 GATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACAT 18719
Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501
|||||||||||||||||||| |||||| | |||||||| || ||||||||||||| ||||
Sbjct 18718 CTATGCGAGTGTTTGGGTGTTAAACCCATACGCGTAATTAACGTGAACGGAGGTGAGAAC 18659
Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561
|| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 18658 CCTTTAGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 18599
Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 18598 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTAAATAGGGTGAAGCCAGAGGAAACTC 18539
Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 18538 TGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 18479
Query 682 GA 683
||
Sbjct 18478 GA 18477
Score = 935 bits (1036), Expect = 0.0
Identities = 606/662 (92%), Gaps = 2/662 (0%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 28543 TGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTATAT 28484
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 28483 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 28424
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 28423 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 28364
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTC-GGCCGGTGCACTCTTCTGCGG 261
|||||||||||||||||| |||| ||| || ||| || || ||||||||| | | ||
Sbjct 28363 GCAACCAGACTTGCCCGCCGTTGATCATCCT-CCCTTCTGGGTGGTGCACTCAGCGGTGG 28305
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
||||||||||||| | | || ||| ||||||||||| ||||| || || || |||||
Sbjct 28304 TCAGGCCAGCATCGGTTTTGGTGGTGGGATAAAGGCCTTGGGAACGTAGCTCCTCTCGGG 28245
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| |||||||||||| |||| ||||| ||| || |||| |||| ||||||| |||||||
Sbjct 28244 GAGTGTTATAGCCCTCGGTGCAATGCCGCCTACCGGGACCGAGGACCGCGCTTCGGCTAG 28185
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 28184 GATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACAT 28125
Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501
||||| |||||||||||||| |||||| | |||||||| || ||||||||||||| ||||
Sbjct 28124 CTATGTGAGTGTTTGGGTGTTAAACCCATACGCGTAATTAACGTGAACGGAGGTGAGAAC 28065
Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561
|| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 28064 CCTTTAGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 28005
Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 28004 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTAAATAGGGTGAAGCCAGAGGAAACTC 27945
Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 27944 TGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 27885
Query 682 GA 683
||
Sbjct 27884 GA 27883
>seq2176
Length=8484
Score = 111 bits (122), Expect = 7e-22
Identities = 78/89 (88%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 491 GAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGA 550
|||||| |||| | | |||||| |||| |||| ||||||||||||||||||||||||
Sbjct 4753 GAGGTGAGAACATTTTAAGGTGCATCATCCACCGGCCCTGATGTCTTCGGATGGATTTGA 4812
Query 551 GTAAGAGCATAGCTGTTGGGACCCGAAAG 579
|||||||||||| ||||||||||||||||
Sbjct 4813 GTAAGAGCATAGTTGTTGGGACCCGAAAG 4841
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079790883950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |