Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq28 77.0 5e-12 >seq28 Length=36639 Score = 77.0 bits (84), Expect = 5e-12 Identities = 68/84 (81%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 140 TGGCACCCCTTCTCCCGAAGTTACGGG-GCCATTTTGCCGAATTCCTTAACCACAGTTCA 198 |||| | |||| |||||||||||||| | | |||||||| |||||||| | ||||| Sbjct 11478 TGGCTCTCCTTATCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCA 11419 Query 199 CCCGAACGCCTTAGTATTCTCTAC 222 | | |||||||| ||||||||||| Sbjct 11418 CTCAAACGCCTTCGTATTCTCTAC 11395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694334418477