Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq28 80.6 8e-13
>seq28
Length=36639
Score = 80.6 bits (88), Expect = 8e-13
Identities = 133/192 (69%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355
||||| | | ||| |||||||| || || | ||||| | | |||||| ||| |
Sbjct 4756 GGGACCAAGACAAGTCATCATGGCCTGAATATTGTGGGCGATAGACGTGCCACATGTTCC 4815
Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCG 415
||||||| | || ||| | || | ||| |||| ||||||| | | | |
Sbjct 4816 TATACAAAATGATGCAAAAATGTGAATTTGAGCTAATCTAATAAAGTAGGATAAAATATG 4875
Query 416 GATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCAT 475
|||||||||||| || ||||||| ||||| ||||| ||||||||||| |||| ||
Sbjct 4876 GATTGTAGTCTGAAATTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCAC 4935
Query 476 GCTACGGTGAAT 487
| |||||||||
Sbjct 4936 GTCACGGTGAAT 4947
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503853375040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |