Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq74 365 7e-99
>seq74
Length=30834
Score = 365 bits (404), Expect = 7e-99
Identities = 236/257 (92%), Gaps = 1/257 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 20159 ACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 20218
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 20219 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 20277
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|||| ||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 20278 ACCAGCCAAAGCTAGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 20337
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 20338 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 20397
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 20398 AGAGCTCTCAATCTGTC 20414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796724747469
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |