Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq74 181 1e-43 >seq74 Length=30834 Score = 181 bits (200), Expect = 1e-43 Identities = 175/216 (81%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct 20803 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTCATTATTCCATGCTAATGTATTCG 20862 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||| ||||| || || Sbjct 20863 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTAGTTCCCCCACA 20922 Query 126 CACC-AATG-AAGGCATACGGGCTCACCAAGAGGTAGGGCTGGGT--AATGCAGTACTCG 181 |||| |||| ||||||| ||| || | | ||| | ||| ||| || |||| | || Sbjct 20923 CACCTAATGAAAGGCAT-GGGGTTCCCTAGAAGGAAAGGCCCGGTCGGAT-CAGTGCACG 20980 Query 182 CCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216 | |||||||||||| | || ||| |||| || ||| Sbjct 20981 CGGTGAGGCGGACC-GACCAACCAGGCCCAAGGTTC 21015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595143787266