Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq74 181 1e-43
>seq74
Length=30834
Score = 181 bits (200), Expect = 1e-43
Identities = 175/216 (81%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||
Sbjct 20803 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTCATTATTCCATGCTAATGTATTCG 20862
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||| ||||| || ||
Sbjct 20863 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTAGTTCCCCCACA 20922
Query 126 CACC-AATG-AAGGCATACGGGCTCACCAAGAGGTAGGGCTGGGT--AATGCAGTACTCG 181
|||| |||| ||||||| ||| || | | ||| | ||| ||| || |||| | ||
Sbjct 20923 CACCTAATGAAAGGCAT-GGGGTTCCCTAGAAGGAAAGGCCCGGTCGGAT-CAGTGCACG 20980
Query 182 CCGTGAGGCGGACCATAGCACCCA-GCCCGAGTTTC 216
| |||||||||||| | || ||| |||| || |||
Sbjct 20981 CGGTGAGGCGGACC-GACCAACCAGGCCCAAGGTTC 21015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595143787266
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |