Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10- 27] 9,749 sequences; 57,952,665 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq74 262 6e-68 >seq74 Length=30834 Score = 262 bits (290), Expect = 6e-68 Identities = 231/281 (82%), Gaps = 8/281 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||| Sbjct 16080 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 16023 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 16022 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 15963 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||| | | |||| | ||| ||||||||||||||||||||||||| | ||||| ||| Sbjct 15962 GAAAGCGACGATTTTATCCCACACATCGTAGTCGGATACGAATAGGCCCATGGCCCTGAA 15903 Query 180 CCTTAGCAGGCCGGCAACG--GGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 |||||| || ||||||| | ||| |||| | | || | ||||| || || Sbjct 15902 TCTTAGCTGGTTGGCAACGCTATCATCC--TTGAAGTGGGTGGTAGT-AGCTGACGTCTT 15846 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| |||||||| || ||| | |||||| ||||| Sbjct 15845 GCAATTTTACCATGCGTGGGAATAGGACATTTGCATACGAC 15805 Score = 262 bits (290), Expect = 6e-68 Identities = 231/281 (82%), Gaps = 8/281 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||| Sbjct 25486 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 25429 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 25428 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 25369 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||| | | |||| | ||| ||||||||||||||||||||||||| | ||||| ||| Sbjct 25368 GAAAGCGACGATTTTATCCCACACATCGTAGTCGGATACGAATAGGCCCATGGCCCTGAA 25309 Query 180 CCTTAGCAGGCCGGCAACG--GGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 |||||| || ||||||| | ||| |||| | | || | ||||| || || Sbjct 25308 TCTTAGCTGGTTGGCAACGCTATCATCC--TTGAAGTGGGTGGTAGT-AGCTGACGTCTT 25252 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| |||||||| || ||| | |||||| ||||| Sbjct 25251 GCAATTTTACCATGCGTGGGAATAGGACATTTGCATACGAC 25211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819122631936