Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20salicellus_20[genbank_20GCA_5F001414355.1_202015-10-
27] 9,749 sequences; 57,952,665 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq74 262 6e-68
>seq74
Length=30834
Score = 262 bits (290), Expect = 6e-68
Identities = 231/281 (82%), Gaps = 8/281 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||
Sbjct 16080 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 16023
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 16022 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 15963
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179
||| | | |||| | ||| ||||||||||||||||||||||||| | ||||| |||
Sbjct 15962 GAAAGCGACGATTTTATCCCACACATCGTAGTCGGATACGAATAGGCCCATGGCCCTGAA 15903
Query 180 CCTTAGCAGGCCGGCAACG--GGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237
|||||| || ||||||| | ||| |||| | | || | ||||| || ||
Sbjct 15902 TCTTAGCTGGTTGGCAACGCTATCATCC--TTGAAGTGGGTGGTAGT-AGCTGACGTCTT 15846
Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| |||||||| || ||| | |||||| |||||
Sbjct 15845 GCAATTTTACCATGCGTGGGAATAGGACATTTGCATACGAC 15805
Score = 262 bits (290), Expect = 6e-68
Identities = 231/281 (82%), Gaps = 8/281 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||
Sbjct 25486 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 25429
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 25428 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 25369
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179
||| | | |||| | ||| ||||||||||||||||||||||||| | ||||| |||
Sbjct 25368 GAAAGCGACGATTTTATCCCACACATCGTAGTCGGATACGAATAGGCCCATGGCCCTGAA 25309
Query 180 CCTTAGCAGGCCGGCAACG--GGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237
|||||| || ||||||| | ||| |||| | | || | ||||| || ||
Sbjct 25308 TCTTAGCTGGTTGGCAACGCTATCATCC--TTGAAGTGGGTGGTAGT-AGCTGACGTCTT 25252
Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| |||||||| || ||| | |||||| |||||
Sbjct 25251 GCAATTTTACCATGCGTGGGAATAGGACATTTGCATACGAC 25211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819122631936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |