Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq245 453 2e-125 >seq245 Length=8279 Score = 453 bits (502), Expect = 2e-125 Identities = 289/314 (92%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 || |||| |||||||||||||||| |||| || |||||| |||| | |||||| ||||| Sbjct 6230 TGATCCGACCGGGCCTTTCCTTCTAGGGAACCCCATGCCTTTCATTAGGTGTGTGGGGGA 6171 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 6170 ACTAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACAT 6111 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 6110 TAGCATGGAATAATGAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 6051 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct 6050 AATGATTAATAGGGATAGTCGGGGGCATCAGTATTCCGTTGTCAGAGGTGAAATTCTTGG 5991 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 ||||| |||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 5990 ATTTACGGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAGTGA 5931 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 5930 ACGAAAGTTAGGGG 5917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915176287168