Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq245 944 0.0 >seq245 Length=8279 Score = 944 bits (1046), Expect = 0.0 Identities = 624/686 (91%), Gaps = 4/686 (1%) Strand=Plus/Minus Query 1 TACGTGACCGGTGGCCTA-GCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAA 58 || ||||| ||| |||| ||| ||| |||||| ||||||||||||||||||||||||| Sbjct 4418 TATGTGACTGGTTGCCTTCGCCTATGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAA 4359 Query 59 TGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 118 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 4358 TGCAGCTCTAAATGGGAGGTATATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 4299 Query 119 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGT 178 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 4298 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGT 4239 Query 179 GAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCC 238 ||||||||||||||||||||||||||||||||||||||| || |||| ||| || ||| Sbjct 4238 GAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCTGCCGTTGATCATCCT-CCCT 4180 Query 239 TC-GGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGC 297 || || ||||||||| | ||||||||||||||||| | | || ||| |||||||||| Sbjct 4179 TCTGGGTGGTGCACTCAGCGGCGGTCAGGCCAGCATCGGTTTTGGTGGTGGGATAAAGGC 4120 Query 298 CCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTG 357 | ||||| || || || |||||| |||||||||||| |||| ||||| ||| || | Sbjct 4119 CTTGGGAACGTAGCTCCTCTCGGGGAGTGTTATAGCCCTCGGTGCAATGCCGCCTACCGG 4060 Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417 ||| |||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 4059 GACCGAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGA 4000 Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477 |||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||| Sbjct 3999 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTTAAACCCATACGCGTA 3940 Query 478 ATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT 537 || || ||||||||||||| |||||| | |||||||| |||||||||||||||||||||| Sbjct 3939 ATTAACGTGAACGGAGGTGAGAACCCTTTAGGGTGCATCATCGACCGATCCTGATGTCTT 3880 Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 3879 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTAA 3820 Query 598 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCG 657 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 3819 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCG 3760 Query 658 ATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||||||||| Sbjct 3759 ATCGTCAAATTTGGGTATAGGGGCGA 3734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079944423050