Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq245 944 0.0
>seq245
Length=8279
Score = 944 bits (1046), Expect = 0.0
Identities = 624/686 (91%), Gaps = 4/686 (1%)
Strand=Plus/Minus
Query 1 TACGTGACCGGTGGCCTA-GCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAA 58
|| ||||| ||| |||| ||| ||| |||||| |||||||||||||||||||||||||
Sbjct 4418 TATGTGACTGGTTGCCTTCGCCTATGTAAAGCTCTTTCGACGAGTCGAGTTGTTTGGGAA 4359
Query 59 TGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 118
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 4358 TGCAGCTCTAAATGGGAGGTATATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 4299
Query 119 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGT 178
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 4298 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGT 4239
Query 179 GAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCC 238
||||||||||||||||||||||||||||||||||||||| || |||| ||| || |||
Sbjct 4238 GAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCTGCCGTTGATCATCCT-CCCT 4180
Query 239 TC-GGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGC 297
|| || ||||||||| | ||||||||||||||||| | | || ||| ||||||||||
Sbjct 4179 TCTGGGTGGTGCACTCAGCGGCGGTCAGGCCAGCATCGGTTTTGGTGGTGGGATAAAGGC 4120
Query 298 CCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTG 357
| ||||| || || || |||||| |||||||||||| |||| ||||| ||| || |
Sbjct 4119 CTTGGGAACGTAGCTCCTCTCGGGGAGTGTTATAGCCCTCGGTGCAATGCCGCCTACCGG 4060
Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417
||| |||| ||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 4059 GACCGAGGACCGCGCTTCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGACCCGTCTTGA 4000
Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477
|||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct 3999 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTTAAACCCATACGCGTA 3940
Query 478 ATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTT 537
|| || ||||||||||||| |||||| | |||||||| ||||||||||||||||||||||
Sbjct 3939 ATTAACGTGAACGGAGGTGAGAACCCTTTAGGGTGCATCATCGACCGATCCTGATGTCTT 3880
Query 538 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGA 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3879 CGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTAA 3820
Query 598 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCG 657
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3819 ATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCG 3760
Query 658 ATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||||||||||
Sbjct 3759 ATCGTCAAATTTGGGTATAGGGGCGA 3734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079944423050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |