Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1906 113 1e-22 >seq1906 Length=51260 Score = 113 bits (124), Expect = 1e-22 Identities = 196/282 (70%), Gaps = 10/282 (4%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | |||||||| Sbjct 31112 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 31171 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 31172 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 31231 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTT---CGCGTT 179 || | || | || ||||||| || | ||||| ||| |||| ||||| || Sbjct 31232 CCCTCATAGGTAAGGCCGCCATTGATCGGGGTTTCCTTCAAAACCAAGCTTATATTAGTC 31291 Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 |||| | ||| |||||| ||| || ||||||| |||||| | |||| | | | Sbjct 31292 AGCTTAGAAAATCCGTTAACCAGCCGACATCGGGCAGAAATCACACTCAATACTTTGATT 31351 Query 240 T-TCGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | | || ||||||||||| |||||| | |||||||||| Sbjct 31352 TATTATCTTACTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 31393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260767332672