Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq245 365 7e-99
seq1910 158 2e-36
>seq245
Length=8279
Score = 365 bits (404), Expect = 7e-99
Identities = 236/257 (92%), Gaps = 1/257 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5416 ACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 5475
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 5476 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 5534
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
|||| ||| || ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 5535 ACCAGCCAAAGCTAGCCTGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTAA 5594
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 5595 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 5654
Query 242 AGAGCTATCAATCTGTC 258
|||||| ||||||||||
Sbjct 5655 AGAGCTCTCAATCTGTC 5671
>seq1910
Length=50487
Score = 158 bits (174), Expect = 2e-36
Identities = 99/107 (93%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 144 ATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAAC 203
|||||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 31644 ATTTAGCAGGGTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAAC 31585
Query 204 TAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250
||||||| ||||||||||||||||| | ||||||||||||||| ||
Sbjct 31584 TAAGAACCGCCATGCACCACCACCCTCAAAATCAAGAAAGAGCTCTC 31538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796780000071
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |