Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19]
2,591 sequences; 63,226,382 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq245 509 3e-142
seq1945 84.2 4e-14
>seq245
Length=8279
Score = 509 bits (564), Expect = 3e-142
Identities = 290/295 (98%), Gaps = 0/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 1334 TACTAAGCTGAATTACCATTGCGATGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1393
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1394 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 1453
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1454 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 1513
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1514 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 1573
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1574 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1628
>seq1945
Length=45302
Score = 84.2 bits (92), Expect = 4e-14
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 232 CTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTAT 291
|||| ||||||||||||||||||||||||||||||| | ||||||||||| |||||||
Sbjct 30605 CTCTCACCTCAAATTTCGAGGGACTAAAGGATCGATAAGTCACACTTTCATAATTTGTAT 30664
Query 292 T 292
|
Sbjct 30665 T 30665
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854377862496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |