Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hymenoscyphus_20scutula_20[genbank_20GCA_5F001399465.1_202015-10-19] 2,591 sequences; 63,226,382 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq245 262 6e-68 >seq245 Length=8279 Score = 262 bits (290), Expect = 6e-68 Identities = 231/281 (82%), Gaps = 8/281 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||| Sbjct 1336 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 1279 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1278 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1219 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||| | | |||| | ||| ||||||||||||||||||||||||| | | ||||| ||| Sbjct 1218 GAAAGCGACGATTTTATCCCACACATCGTAGTCGGATACGAATAGGCCCTTGGCCCTGAA 1159 Query 180 CCTTAGCAGGCCGGCAACG--GGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 |||||| || ||||||| | ||| |||| | | || | |||| || || Sbjct 1158 TCTTAGCTGGTTGGCAACGCTATCATCC--TTGAAGTGGGTGGTAGT-AGCTAACGTCTT 1102 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| |||||||| || ||| | |||||| ||||| Sbjct 1101 GCAATTTTACCATGCGTGGGAATAGGACATTTGCATACGAC 1061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819179437824