Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1835 432 7e-119 >seq1835 Length=10949 Score = 432 bits (478), Expect = 7e-119 Identities = 285/314 (91%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64 |||||||||||||||||||| |||| ||| || ||||| |||||||||| ||| |||||| Sbjct 9023 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATGCACTTCACTGGGCGTGGCGGGGA 8964 Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124 |||||| ||||||||||||||||||||||| || | |||||||| |||||| |||||| Sbjct 8963 AACAGGACGTTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGGATACAT 8904 Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184 |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||| Sbjct 8903 TAGCATGGAATAATGAAATAGGACGCGCGGTTTTATTTTGTTGGTTTCTAGGACCGCCGT 8844 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| Sbjct 8843 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGG 8784 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 || || ||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 8783 ATCTACTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 8725 Query 305 ACGAAAGTTAGGGG 318 |||||||||||||| Sbjct 8724 ACGAAAGTTAGGGG 8711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915181384832