Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq1835 699 0.0
>seq1835
Length=10949
Score = 699 bits (774), Expect = 0.0
Identities = 563/670 (84%), Gaps = 14/670 (2%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||
Sbjct 5729 TGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 5670
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 5669 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 5610
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| |||||| || |||||||||||||||||||||||||||
Sbjct 5609 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTC 5550
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261
| ||||||| || | | | ||| ||||| ||| ||||||||| |||| |||
Sbjct 5549 ACGACCAGACCTGGTCCCGGCGAATCACCCGGCGTTCTC-GCCGGTGCA--CTTCGACGG 5493
Query 262 ----TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317
|||||||||||||| || || | ||| |||||| |||||| ||||| |||
Sbjct 5492 GCTTCCAGGCCAGCATCAGTCCGCGCCGGGGGACAAAGGCGGCGGGAACGTGGCTCCC-- 5435
Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC-TC-C 375
| ||| ||||||||||||| | | ||||| | | ||||||||| |||||| || |
Sbjct 5434 CAGGGAGTGTTATAGCCCGCCGCGCAATGCCCCGGGAGCGGACTGAGGACCGCGCGTCAC 5375
Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435
|| ||||||||||||||||||| | |||| ||||||||| ||||||||||||||||||
Sbjct 5374 CGCAAGGATGCTGGCGTAATGGTCTTCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC 5315
Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAA-CCCGTGCGCGTAATGAAAGTGAACGG-AG 493
| |||||||||||| ||| |||||| ||| ||||||||||||||||||||| ||
Sbjct 5314 GTCCTCGTATGCGAGTGTTGGGGCGTCAAACCCCCCGCGCGTAATGAAAGTGAACGGCAG 5255
Query 494 GTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553
||| || ||| | ||| ||| ||||||||||||||||||| |||||||||||||||||
Sbjct 5254 GTGAGAGCCCTCGCGGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTA 5195
Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613
|||||||| | |||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 5194 AGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTGTAGGGTGAAGCCAGA 5135
Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 5134 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGGGC 5075
Query 674 ATAGGGGCGA 683
|| |||||||
Sbjct 5074 ATGGGGGCGA 5065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079956370700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |