Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1835 699 0.0 >seq1835 Length=10949 Score = 699 bits (774), Expect = 0.0 Identities = 563/670 (84%), Gaps = 14/670 (2%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || Sbjct 5729 TGTGAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATAT 5670 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 5669 GTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 5610 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| |||||| || ||||||||||||||||||||||||||| Sbjct 5609 TGAAAAGCACTTTGAAAAGAGGGTTAAACAGTACGTGAAATTGTTGAAAGGGAAGCGCTC 5550 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261 | ||||||| || | | | ||| ||||| ||| ||||||||| |||| ||| Sbjct 5549 ACGACCAGACCTGGTCCCGGCGAATCACCCGGCGTTCTC-GCCGGTGCA--CTTCGACGG 5493 Query 262 ----TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 |||||||||||||| || || | ||| |||||| |||||| ||||| ||| Sbjct 5492 GCTTCCAGGCCAGCATCAGTCCGCGCCGGGGGACAAAGGCGGCGGGAACGTGGCTCCC-- 5435 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC-TC-C 375 | ||| ||||||||||||| | | ||||| | | ||||||||| |||||| || | Sbjct 5434 CAGGGAGTGTTATAGCCCGCCGCGCAATGCCCCGGGAGCGGACTGAGGACCGCGCGTCAC 5375 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 || ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||| Sbjct 5374 CGCAAGGATGCTGGCGTAATGGTCTTCAGCGACCCGTCTTGAAACACGGACCAAGGAGTC 5315 Query 436 TAACATCTATGCGAGTGTTTGGGTGTCAAA-CCCGTGCGCGTAATGAAAGTGAACGG-AG 493 | |||||||||||| ||| |||||| ||| ||||||||||||||||||||| || Sbjct 5314 GTCCTCGTATGCGAGTGTTGGGGCGTCAAACCCCCCGCGCGTAATGAAAGTGAACGGCAG 5255 Query 494 GTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTA 553 ||| || ||| | ||| ||| ||||||||||||||||||| ||||||||||||||||| Sbjct 5254 GTGAGAGCCCTCGCGGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTTGAGTA 5195 Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 |||||||| | |||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 5194 AGAGCATACGGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTGTAGGGTGAAGCCAGA 5135 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGT 673 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 5134 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAACATGGGC 5075 Query 674 ATAGGGGCGA 683 || ||||||| Sbjct 5074 ATGGGGGCGA 5065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079956370700