Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq1835 232 1e-58
>seq1835
Length=10949
Score = 232 bits (256), Expect = 1e-58
Identities = 224/279 (80%), Gaps = 8/279 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 1500 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1443
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1442 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1383
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| || ||| | | || |||| | || |||| ||||||||||| |||| |
Sbjct 1382 GAACGCGGCGATAC-CGCCCGCACGT-ACAGACGGACACGAATAGGCTCCGGCTTAGCGT 1325
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|| |||||| | ||| || ||| ||||||||| ||| | | | || ||||
Sbjct 1324 CTCAGCAGG--TGATGCGGCCGCGGCGCAGGAAGCGCGCCGCGGTGA-TTCACGTATTGT 1268
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| || | || ||| |||| |||||||||||||
Sbjct 1267 AATTTCAGCACGAGCGGGGTCAAATTCTTTGCAGACGAC 1229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819183858176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |