Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1835 232 1e-58 >seq1835 Length=10949 Score = 232 bits (256), Expect = 1e-58 Identities = 224/279 (80%), Gaps = 8/279 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 1500 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1443 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1442 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1383 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||||| || ||| | | || |||| | || |||| ||||||||||| |||| | Sbjct 1382 GAACGCGGCGATAC-CGCCCGCACGT-ACAGACGGACACGAATAGGCTCCGGCTTAGCGT 1325 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 || |||||| | ||| || ||| ||||||||| ||| | | | || |||| Sbjct 1324 CTCAGCAGG--TGATGCGGCCGCGGCGCAGGAAGCGCGCCGCGGTGA-TTCACGTATTGT 1268 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| || | || ||| |||| ||||||||||||| Sbjct 1267 AATTTCAGCACGAGCGGGGTCAAATTCTTTGCAGACGAC 1229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819183858176