Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1835 686 0.0 >seq1835 Length=10949 Score = 686 bits (760), Expect = 0.0 Identities = 459/508 (90%), Gaps = 5/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 9181 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCGGTATTTATTGTCACTACCT 9240 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 9241 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTC 9300 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 9301 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCCACCATGTTT 9360 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| |||||| | |||||||||||||||||| ||| |||||||||||||||||||||| Sbjct 9361 GGCCCCTATCCAAACATCGAAAGTTGATAGGGAAGATATTTGAATGAACCATCGCCGGCG 9420 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCC---GA-AGGGCGT 296 || |||| ||||||||| |||||| ||||||||||| ||||||| || |||||| Sbjct 9421 CAGGGCCGTGCGATTCGAACAGTTATCATGAATCACCACTGAGCCCCCGTGAGGGGGCGT 9480 Query 297 TGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCT 356 ||| |||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||| Sbjct 9481 TGGCTTTTAATCTAATAAATACATCCCTTCCGGAGTCGGGATTTTTAGCATGTATTAGCT 9540 Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416 |||||||||||||||||||||| |||||| || |||||||||||||||||||| || || Sbjct 9541 CTAGAATTACCACGGTTATCCAAGTAGTAGGGCGCTATCAAATAAACGATAACTTATATA 9600 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||| | ||| | |||||||||||| ||||||||||||||||||| Sbjct 9601 ATGAGCCATTCGCAGTTTCGCGGTACA-ATTGCTTATACTCAGACATGCATGGCTTAATC 9659 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 9660 TTTGAGACAAGCATATGACTACTGGCAG 9687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510369278464