Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18] 2,034 sequences; 28,856,456 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1793 255 5e-63 seq1923 147 2e-30 >seq1793 Length=11804 Score = 255 bits (282), Expect = 5e-63 Identities = 627/942 (67%), Gaps = 8/942 (1%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 |||||||| || || || ||||||||||| || | |||||| || |||| || |||| | Sbjct 7668 GGAAGGGCGAGCGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATA 7609 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || || ||||| |||||| | | ||||| || | |||| || || ||||| Sbjct 7608 ATCTCCGTGCAGAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTG 7549 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 ||||| ||||||||||| | |||| | || ||||||||||| || | || | ||| Sbjct 7548 TTGCAAGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATG 7489 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATG 66240 | || ||| || | || | || | | | |||| || | || ||||| | Sbjct 7488 GAGTACCAGAGCTTCTGGGCGCGGATGGT-CTTGCGACCCTTGCCCTCACGCTCGTACTT 7430 Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300 |||||| || || || ||||| | |||| || | || |||| | || Sbjct 7429 TTCGTACAGAGCCTCAAACTCCTCACCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGG 7370 Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360 |||||| || | ||| || || | || || ||||| ||| || |||||||| ||||| Sbjct 7369 ACACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCA 7310 Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420 |||||| ||| || || || || || |||||| ||||||| || || || | ||| Sbjct 7309 CAGGGCGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTC 7250 Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480 |||||||||||||| || || ||||| || |||||||||||||| || | || || Sbjct 7249 GAGGAACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCACCTGGTCG 7190 Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540 ||| |||||| ||||| || || | || |||||||| || || | ||| || | Sbjct 7189 CTTGTTGCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAAT 7130 Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600 || || || || | || |||||||| | ||| || || || || || ||| Sbjct 7129 GACGCCATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTG 7070 Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTC 66658 || || || ||||| || || ||| | || ||||| || || || | |||| Sbjct 7069 GACGTTGAGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTC 7010 Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718 | ||||| || ||| |||| |||| ||| | |||| |||| || || ||| Sbjct 7009 --ATAGATGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTGG 6952 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778 | | ||| || | || ||| ||||| || | ||||| || ||| | | || ||| Sbjct 6951 GCCTGGGGAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGAC 6892 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACA 66837 ||| |||||||| || ||||| |||||||| ||||| || |||| || ||| Sbjct 6891 ATGAGGTTGTACGTTTCAATGACGCGCTCAATGTTGTCGCCCCAGATGCCGACAGCGACA 6832 Query 66838 TCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGA 66897 ||||| | | | || || || ||||| | | | |||| | || | ||| || Sbjct 6831 -CGCATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTACGA 6773 Query 66898 GCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 || ||||| ||||||| ||||||||| ||||||||| || Sbjct 6772 TCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTC 6731 Score = 111 bits (122), Expect = 1e-19 Identities = 322/484 (67%), Gaps = 10/484 (2%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||||| || || |||| || | | ||||||||||| ||| Sbjct 8574 TCGACGGTGAACTGGATCGGCGCGGCGGCAGCCTGCGTGCGCAAGTAGTACATGCCCGTC 8515 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 ||||| || ||| ||| | || |||||||| | | ||||||| | | || | Sbjct 8514 TTGAGACCCAGCTT-CCAGCCGGCAAAGTGCATCGAGG-TGATTTTGCCCATCGTGGGGT 8457 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || |||| |||||| ||| || ||| | || || || || |||| Sbjct 8456 CTTTCATGTGGATGTTCAGCGACTGCGACTGGTCAATGAAGGCGCCGCGGTCGGCGGCCA 8397 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | || | |||| ||| |||||||| ||||||||||| || || | | | || Sbjct 8396 TCTGAACAACCTGACGCTGCGAAATCTCCCAAACGGTCTTGTAGAG-CGCCTTGATGTCG 8338 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 || || | ||||| |||| || || ||||| ||||| || ||| Sbjct 8337 GCAGGGATGTTGGGAATGTTTTGGATGGATCCGTTCTCGGCAATGATGCGGTTCTTCATG 8278 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTT 65432 | || ||||||| ||||| |||| || | |||| || ||| || | ||| | Sbjct 8277 GCATCGGACCACAGACCCATGTCGACCAGGTCCTTGAGG--AGCCACGGGTTCACGACCT 8220 Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492 ||||||| || | || ||||| || ||||||||||||||| || || || | | Sbjct 8219 GGAACTCCCCAGCCAAGACACGGCGCTGGTAGATGTTGGACGTGTATGGCTCGAAACACT 8160 Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552 || ||||||| || || || | || || || || ||||||||||| | |||||| |||| Sbjct 8159 CATTGTTGCCGAGGATCTGAGAGGTCGAGGCCGTGGGCATGGGAGCAAGCAACAAGGAGT 8100 Query 65553 TTCG 65556 | || Sbjct 8099 TGCG 8096 >seq1923 Length=107003 Score = 147 bits (162), Expect = 2e-30 Identities = 302/444 (68%), Gaps = 5/444 (1%) Strand=Plus/Minus Query 61489 CGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATC 61548 ||||| | || ||||| | || ||||| | || ||||| || | |||||| | ||| Sbjct 7906 CGATTAGTCGCCTTTGCCGCTGTTGAGGGCATCTTCTTCAGCGGCGCCTTTGCCTCCATC 7847 Query 61549 TTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA 61608 |||||| ||||||| || || | |||||||| ||||||||| || || | || || Sbjct 7846 TTTTGGCTGAAGAAGCGGGGCTTGATGCCCGGCCTGACCTTCTCTAACGAACTCATCTCG 7787 Query 61609 CGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAAT 61668 ||||||||||| |||| || ||||| |||| || ||| | ||| | | Sbjct 7786 CGCGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTG--CACTCGC-ACCTGAAGCAC 7730 Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728 ||| | || || | || || | || || || || ||||| ||||| Sbjct 7729 CGTGCCAGCAAGCAGATCATCAAAGACATCATCACCGACGCCGTCACCATCGAGCAGGAG 7670 Query 61729 TTTCTGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCA 61787 || ||||| || |||||||| || | | || |||||||||| | || ||| ||| Sbjct 7669 TTCCTGACCGAGGCTTTGCC-GTGTGCTCTACTCGGCATGAACGCTACTCTGATGAAGCA 7611 Query 61788 GTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAA 61847 ||| |||||||| || || ||||| || |||||| | | || | || | | || || Sbjct 7610 GTACATTGAATTCGTCGCTGACCGCCTCCTGGTCGCTCTCGGCAACGAGAAGGTGTACAA 7551 Query 61848 TACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907 ||| ||||| |||||||||||||| | || || |||| ||||||||| || || || Sbjct 7550 GACGGCCAACCCCTTTGATTTCATGGAAAACATCTCACTGGGTGGCAAGACCAACTTCTT 7491 Query 61908 CGAGAAACGTGTAGGCGACTATCA 61931 ||||| || || ||||| || || Sbjct 7490 TGAGAAGCGAGTCGGCGAGTACCA 7467 Score = 132 bits (146), Expect = 4e-26 Identities = 231/333 (69%), Gaps = 5/333 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| |||||||| || || || || ||||||||||| | || ||| | ||| | Sbjct 8387 ATTTGGCAAATGTACAAGAAAGCCGAGGCCTCCTTCTGGACAGCCGAAGAGATTGATCTC 8328 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACA---ACATTTCATTAAA 61203 || || || || | || ||| | | || || | ||| | | | ||||| Sbjct 8327 TCAAAGGATCTGCACGATTGGAATAATCGATTGAATGATGACGAGAAATACTTCATCTCT 8268 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 || | |||| ||||||||||| || ||||| |||||||| ||||| | | || || Sbjct 8267 CACATCCTGGCTTTCTTTGCCGCCTCTGACGGCATCGTCAACGAGAACCTGGTAGAGCGA 8208 Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| || | ||||| || || | || || || || |||||||| || ||||| || Sbjct 8207 TTCA-GCGGCGAGGTTCAGGTTCCAGAAGCCCGATGCTTCTACGGGTTTCAGATCATGAT 8149 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| ||||||| |||| ||| | || ||||| || ||||||| ||||| || Sbjct 8148 GGAGAACATCCACTCTGAGACATACTCGTTGCTGATCGACACATACATCAAGGAGCACGC 8089 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGAC 61415 | ||| | |||||||||||||||||||| Sbjct 8088 CCAGCGTAATTACTTGTTCAATGCCATCGAGAC 8056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558144537760