Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypocrella_20siamensis_20[genbank_20GCA_5F000731825.1_202014-07-18]
2,034 sequences; 28,856,456 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1793 255 5e-63
seq1923 147 2e-30
>seq1793
Length=11804
Score = 255 bits (282), Expect = 5e-63
Identities = 627/942 (67%), Gaps = 8/942 (1%)
Strand=Plus/Minus
Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061
|||||||| || || || ||||||||||| || | |||||| || |||| || |||| |
Sbjct 7668 GGAAGGGCGAGCGAAGCAAGGTTGCAGACGGCCACCTCGTCCGGGGCGGAGTATTCGATA 7609
Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121
|| || ||||| |||||| | | ||||| || | |||| || || |||||
Sbjct 7608 ATCTCCGTGCAGAGATTAGAACTTCTGATGGTTCCTAGGTTCTTCTGGTTGCTCTTCTTG 7549
Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181
||||| ||||||||||| | |||| | || ||||||||||| || | || | |||
Sbjct 7548 TTGCAAGCATCCTTGTAGAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCTTCCAAAATG 7489
Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTTTGCGTTCGTAATG 66240
| || ||| || | || | || | | | |||| || | || ||||| |
Sbjct 7488 GAGTACCAGAGCTTCTGGGCGCGGATGGT-CTTGCGACCCTTGCCCTCACGCTCGTACTT 7430
Query 66241 TTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGG 66300
|||||| || || || ||||| | |||| || | || |||| | ||
Sbjct 7429 TTCGTACAGAGCCTCAAACTCCTCACCATAGCAGTCGGCAAGGCCGGGGCACTCATTGGG 7370
Query 66301 ACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCA 66360
|||||| || | ||| || || | || || ||||| ||| || |||||||| |||||
Sbjct 7369 ACACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCA 7310
Query 66361 GAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTC 66420
|||||| ||| || || || || || |||||| ||||||| || || || | |||
Sbjct 7309 CAGGGCGAGGAAAAGGTCCCGCGCGCGAACCTCCTCCTTGCCGTGGTTCTTACGTAGGTC 7250
Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480
|||||||||||||| || || ||||| || |||||||||||||| || | || ||
Sbjct 7249 GAGGAACTCAAAGACATCAGCGTGCCAAGGCTCCAGGTAGATGGCAAAGGCACCTGGTCG 7190
Query 66481 TTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTAC 66540
||| |||||| ||||| || || | || |||||||| || || | ||| || |
Sbjct 7189 CTTGTTGCCACCCTGGTCTACATATCTGGCCGTGTTGTTGAACACTCGGAGCATGGGAAT 7130
Query 66541 GAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTG 66600
|| || || || | || |||||||| | ||| || || || || || |||
Sbjct 7129 GACGCCATTGGAAGTACCGTTGGTGCCAGCAATGTATGAGCCAGTGGCACGGATGCGGTG 7070
Query 66601 AACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACA-ATC-GGCCACTGTC 66658
|| || || ||||| || || ||| | || ||||| || || || | ||||
Sbjct 7069 GACGTTGAGGCCAATGCCGCCAGCCATTTTGGAGATCATGGCGCAGGTCTTGAGCGTGTC 7010
Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718
| ||||| || ||| |||| |||| ||| | |||| |||| || || |||
Sbjct 7009 --ATAGATGCCCTCGATGCTGTCATCCTTCATGTCGACGAGGAAGCAGGATGACAGCTGG 6952
Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778
| | ||| || | || ||| ||||| || | ||||| || ||| | | || |||
Sbjct 6951 GCCTGGGGAGTACCAGCATTGAAAAGGGTCGGAGAGGCGTGGGTGAAGAACTTGCTGGAC 6892
Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACA 66837
||| |||||||| || ||||| |||||||| ||||| || |||| || |||
Sbjct 6891 ATGAGGTTGTACGTTTCAATGACGCGCTCAATGTTGTCGCCCCAGATGCCGACAGCGACA 6832
Query 66838 TCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGA 66897
||||| | | | || || || ||||| | | | |||| | || | ||| ||
Sbjct 6831 -CGCATAATCATATGCTGGGGTCGCTCGACAATCTTGCCGTTGAGCTTCAGGAGGTACGA 6773
Query 66898 GCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATC 66939
|| ||||| ||||||| ||||||||| ||||||||| ||
Sbjct 6772 TCGCTCCAGAGTCTTGAAGCCAAAGTACTGGTAATTGAAGTC 6731
Score = 111 bits (122), Expect = 1e-19
Identities = 322/484 (67%), Gaps = 10/484 (2%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||||||||||| || || |||| || | | ||||||||||| |||
Sbjct 8574 TCGACGGTGAACTGGATCGGCGCGGCGGCAGCCTGCGTGCGCAAGTAGTACATGCCCGTC 8515
Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195
||||| || ||| ||| | || |||||||| | | ||||||| | | || |
Sbjct 8514 TTGAGACCCAGCTT-CCAGCCGGCAAAGTGCATCGAGG-TGATTTTGCCCATCGTGGGGT 8457
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || |||| |||||| ||| || ||| | || || || || ||||
Sbjct 8456 CTTTCATGTGGATGTTCAGCGACTGCGACTGGTCAATGAAGGCGCCGCGGTCGGCGGCCA 8397
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314
| | || | |||| ||| |||||||| ||||||||||| || || | | | ||
Sbjct 8396 TCTGAACAACCTGACGCTGCGAAATCTCCCAAACGGTCTTGTAGAG-CGCCTTGATGTCG 8338
Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374
|| || | ||||| |||| || || ||||| ||||| || |||
Sbjct 8337 GCAGGGATGTTGGGAATGTTTTGGATGGATCCGTTCTCGGCAATGATGCGGTTCTTCATG 8278
Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATG-TTGAACCAAGTGACGA-TTGATGACTT 65432
| || ||||||| ||||| |||| || | |||| || ||| || | ||| |
Sbjct 8277 GCATCGGACCACAGACCCATGTCGACCAGGTCCTTGAGG--AGCCACGGGTTCACGACCT 8220
Query 65433 GGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATT 65492
||||||| || | || ||||| || ||||||||||||||| || || || | |
Sbjct 8219 GGAACTCCCCAGCCAAGACACGGCGCTGGTAGATGTTGGACGTGTATGGCTCGAAACACT 8160
Query 65493 CAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGT 65552
|| ||||||| || || || | || || || || ||||||||||| | |||||| ||||
Sbjct 8159 CATTGTTGCCGAGGATCTGAGAGGTCGAGGCCGTGGGCATGGGAGCAAGCAACAAGGAGT 8100
Query 65553 TTCG 65556
| ||
Sbjct 8099 TGCG 8096
>seq1923
Length=107003
Score = 147 bits (162), Expect = 2e-30
Identities = 302/444 (68%), Gaps = 5/444 (1%)
Strand=Plus/Minus
Query 61489 CGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATC 61548
||||| | || ||||| | || ||||| | || ||||| || | |||||| | |||
Sbjct 7906 CGATTAGTCGCCTTTGCCGCTGTTGAGGGCATCTTCTTCAGCGGCGCCTTTGCCTCCATC 7847
Query 61549 TTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCA 61608
|||||| ||||||| || || | |||||||| ||||||||| || || | || ||
Sbjct 7846 TTTTGGCTGAAGAAGCGGGGCTTGATGCCCGGCCTGACCTTCTCTAACGAACTCATCTCG 7787
Query 61609 CGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAAT 61668
||||||||||| |||| || ||||| |||| || ||| | ||| | |
Sbjct 7786 CGCGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTG--CACTCGC-ACCTGAAGCAC 7730
Query 61669 CGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAA 61728
||| | || || | || || | || || || || ||||| |||||
Sbjct 7729 CGTGCCAGCAAGCAGATCATCAAAGACATCATCACCGACGCCGTCACCATCGAGCAGGAG 7670
Query 61729 TTTCTGACTGACGCTTTGCCCGTCT-CACTCATCGGCATGAATTGTGGACTAATGTCGCA 61787
|| ||||| || |||||||| || | | || |||||||||| | || ||| |||
Sbjct 7669 TTCCTGACCGAGGCTTTGCC-GTGTGCTCTACTCGGCATGAACGCTACTCTGATGAAGCA 7611
Query 61788 GTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAA 61847
||| |||||||| || || ||||| || |||||| | | || | || | | || ||
Sbjct 7610 GTACATTGAATTCGTCGCTGACCGCCTCCTGGTCGCTCTCGGCAACGAGAAGGTGTACAA 7551
Query 61848 TACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907
||| ||||| |||||||||||||| | || || |||| ||||||||| || || ||
Sbjct 7550 GACGGCCAACCCCTTTGATTTCATGGAAAACATCTCACTGGGTGGCAAGACCAACTTCTT 7491
Query 61908 CGAGAAACGTGTAGGCGACTATCA 61931
||||| || || ||||| || ||
Sbjct 7490 TGAGAAGCGAGTCGGCGAGTACCA 7467
Score = 132 bits (146), Expect = 4e-26
Identities = 231/333 (69%), Gaps = 5/333 (2%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
||||||| |||||||| || || || || ||||||||||| | || ||| | ||| |
Sbjct 8387 ATTTGGCAAATGTACAAGAAAGCCGAGGCCTCCTTCTGGACAGCCGAAGAGATTGATCTC 8328
Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACA---ACATTTCATTAAA 61203
|| || || || | || ||| | | || || | ||| | | | |||||
Sbjct 8327 TCAAAGGATCTGCACGATTGGAATAATCGATTGAATGATGACGAGAAATACTTCATCTCT 8268
Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263
|| | |||| ||||||||||| || ||||| |||||||| ||||| | | || ||
Sbjct 8267 CACATCCTGGCTTTCTTTGCCGCCTCTGACGGCATCGTCAACGAGAACCTGGTAGAGCGA 8208
Query 61264 TTCGCGCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322
||| || | ||||| || || | || || || || |||||||| || ||||| ||
Sbjct 8207 TTCA-GCGGCGAGGTTCAGGTTCCAGAAGCCCGATGCTTCTACGGGTTTCAGATCATGAT 8149
Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382
|||||| ||||||| |||| ||| | || ||||| || ||||||| ||||| ||
Sbjct 8148 GGAGAACATCCACTCTGAGACATACTCGTTGCTGATCGACACATACATCAAGGAGCACGC 8089
Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGAC 61415
| ||| | ||||||||||||||||||||
Sbjct 8088 CCAGCGTAATTACTTGTTCAATGCCATCGAGAC 8056
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397558144537760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |