Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11]
899 sequences; 37,704,138 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq563 385 2e-104
seq545 347 5e-93
>seq563
Length=1697
Score = 385 bits (426), Expect = 2e-104
Identities = 336/409 (82%), Gaps = 9/409 (2%)
Strand=Plus/Minus
Query 28 AGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTT 87
||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||
Sbjct 403 AGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTATATTTCTT 344
Query 88 CTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 147
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 343 CTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAA 284
Query 148 AGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAAC 207
||||||||| |||||| |||||| |||||||||||||||||||||||||||| |||| ||
Sbjct 283 AGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAGGGAAGCGTTTGCGAC 224
Query 208 CAGA-CTTGCCCGCAGTTGCTCAACC-GGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAG 265
|||| ||| ||| | | ||| || | ||| || |||||||| | | | ||
Sbjct 223 CAGACCTTTTCCG-GGCGGATCATCCAGTGTTCTC-GCTGGTGCACTTCGCCCGGTTTAG 166
Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGT 325
||||||||| | || | |||||||| || ||||| || | | ||| ||| ||
Sbjct 165 GCCAGCATCGGTTCTCTTAGGGGGATAAAGACCTTGGGAACGTAG--CTCTTTCGGGAGT 108
Query 326 GTTATAGCCCGGGGTGGAATGCGGCCCGC-CTGGACTGAGGTCCGCGCTCCGGCTAGGAT 384
|||||||||| |||| ||| | || | |||| |||| ||||||| ||||||||||
Sbjct 107 GTTATAGCCCCTGGTGTAATAC--CCTTCAGGGGACCGAGGACCGCGCTTCGGCTAGGAT 50
Query 385 GCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAG 433
|||||||||||||| || | || ||||||||| ||||||||||||||||
Sbjct 49 GCTGGCGTAATGGTCGTCAACGACCCGTCTTGAAACACGGACCAAGGAG 1
>seq545
Length=1757
Score = 347 bits (384), Expect = 5e-93
Identities = 225/247 (91%), Gaps = 0/247 (0%)
Strand=Plus/Plus
Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG 496
||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 3 AACATTGGTGCGAGTGTTTGGGTGTTAAACCCTCACGCGTAATGAAAGTGAACGGAGGTG 62
Query 497 GGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556
|| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 63 AGAGCCCGTACGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 122
Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616
|||| ||||| ||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 123 GCATCACTGTTCGGACCCGAAAGATGGTGAACTATGCGTGGATAGGGTGAAGCCAGAGGA 182
Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676
||||||||||||||||||||||||||||| ||||||||||||||||||||| || | ||
Sbjct 183 AACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATCTGCGCATG 242
Query 677 GGGGCGA 683
|||||||
Sbjct 243 GGGGCGA 249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079980716450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |