Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq563 349 6e-94 seq45 77.0 5e-12 >seq563 Length=1697 Score = 349 bits (386), Expect = 6e-94 Identities = 235/259 (91%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1407 TACTCGCTGGCTCTGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1466 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| ||| || || |||||||||||||||||||||| Sbjct 1467 ACCTGTTATTGCCTCAAACTTCCATCCGCTTGA-GCGGATAGTCCCTCTAAGAAGCCAGC 1525 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| || | || |||||||||||||||||||||||||||||||||||| |||| Sbjct 1526 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 1584 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 1585 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 1644 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 1645 AAAGAGCTCTCAATCTGTC 1663 >seq45 Length=251214 Score = 77.0 bits (84), Expect = 5e-12 Identities = 53/59 (90%), Gaps = 1/59 (2%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACA 59 |||||| |||||||| |||| || ||||||||||||||||||||||||| |||| |||| Sbjct 233748 TACTCGCTGGCTCCGCCAGTATAACGCGCGTGCGGCCCAGAACATCTAA-GGCACCACA 233691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796793060619