Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11]
899 sequences; 37,704,138 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq555 242 6e-62
seq25 194 3e-47
>seq555
Length=1722
Score = 242 bits (268), Expect = 6e-62
Identities = 228/284 (80%), Gaps = 16/284 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 1639 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1582
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1581 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1522
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | |||| ||| | ||||| ||||||||||||||||||||| || |
Sbjct 1521 GAACGCGGTGATAC-CTCCCACACGTTGTAGTTGGATACGAATAGGCTTCGGCCTCGCAT 1463
Query 181 CTTAGCAGGCCGGCAACGGGCGTC--CCGCGGAAGCG----CGGGGCGCTCAGCTGGCGG 234
||||| ||| | || | || |||||| | |||| | | |||
Sbjct 1462 CTTAGGTGGC---GATTGGTCCTCTATTTCGGAAGAGATTTAGGGG----TATTTCGCGT 1410
Query 235 ATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| ||||| | || ||| || |||||||||||||||||||
Sbjct 1409 ATTGTAATTTTAGCACGCGTGGGATTAAATCCTTTGCAGACGAC 1366
>seq25
Length=410318
Score = 194 bits (214), Expect = 3e-47
Identities = 123/131 (94%), Gaps = 2/131 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 129 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 72
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 71 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 12
Query 121 GAACGGGGTGA 131
||||| |||||
Sbjct 11 GAACGCGGTGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819192865536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |