Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CI-4A_20[genbank_20GCA_5F002120315.1_202017-05-11] 899 sequences; 37,704,138 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq43 87.8 7e-12 >seq43 Length=264471 Score = 87.8 bits (96), Expect = 7e-12 Identities = 111/152 (73%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||| ||||| || |||| | | ||||||||||||||||| || || || || | Sbjct 93202 CAATCGTCATTCGAGACGGGATGGCGTGGGGGTTGATGATGATGTCCGGGACGATACCCT 93261 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | ||| |||||||| || || | || ||| ||| ||||||||||| || | | Sbjct 93262 CGCGGGTGAAGGGCATGTCCTCTTGGCGATATGTGACACCGATGGTTCCCTTCTGTCCGT 93321 Query 364545 AGCGAGAAGCAAACTTGTCGCCAATGACTGGG 364576 ||| ||||| || || || || || ||||| Sbjct 93322 GGCGCGAAGCGAATTTATCTCCGAT--CTGGG 93351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884864689053807