Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq230 111 3e-22 >seq230 Length=64647 Score = 111 bits (122), Expect = 3e-22 Identities = 174/248 (70%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 ||||||| | | ||||| ||| | || ||| | || | | | |||| |||| || Sbjct 9480 ACTTTTATTATATAAAAAAAAGAATATTTAAAATAAGCTTATATTTAAATATATTAATAT 9421 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||| ||||||| | || |||||| ||||||| || | | |||| || Sbjct 9420 AAAATAATAAAATAGGATATATAATTTTATTTTATTGGTTTTTAAAATTGTTATAATAAT 9361 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||| | ||| | | |||| |||| | | |||| |||||||| ||||||| Sbjct 9360 TAATAGGGATAATTAAAGGTATTAATATTTAATTATTAAAGGTAAAATTCTTAGATTTAT 9301 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 |||| |||||||| | ||||| || | || ||| |||| |||||| | || ||| Sbjct 9300 TGAAAACTAACTATTATAAAAGCATTTATTAAAGATATTTTTATTAATTA-AAAATAAAA 9242 Query 311 GTTAGGGG 318 ||||||| Sbjct 9241 ATTAGGGG 9234 Score = 93.3 bits (102), Expect = 8e-17 Identities = 172/251 (69%), Gaps = 1/251 (0%) Strand=Plus/Plus Query 68 AGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAG 127 |||||||||| | ||||||||||| | | || |||| | || | | | |||| |||| Sbjct 15092 AGGACTTTTATTATGAAAAAATTAAAATATTTAAAGTAAGCTTATATTTAAATATATTAA 15151 Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAAT 187 || ||||||| |||| | | || |||||| || |||||| || |||| Sbjct 15152 TATAAAATAATAAAATAAAATATATAATTTTATTTTATTAATTTCTAAGATTATTATAAT 15211 Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247 |||||||||| ||| | ||| | | ||| |||| | | |||| |||||||| |||| Sbjct 15212 GATTAATAGGAATAATTAAAGGTATTAATATATAATTATTAAAGGTAAAATTCTTAGATT 15271 Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307 |||| || | ||| || | |||| || | || || |||| |||||| | || Sbjct 15272 TATTAAAAATTAATTATTATAAAAGTATTTATTAATAATATTTTTATTAATTA-AAAATA 15330 Query 308 AAAGTTAGGGG 318 ||||||| ||| Sbjct 15331 AAAGTTAAGGG 15341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915195378240