Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05-
11] 505 sequences; 46,585,682 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq230 111 3e-22
>seq230
Length=64647
Score = 111 bits (122), Expect = 3e-22
Identities = 174/248 (70%), Gaps = 1/248 (0%)
Strand=Plus/Minus
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130
||||||| | | ||||| ||| | || ||| | || | | | |||| |||| ||
Sbjct 9480 ACTTTTATTATATAAAAAAAAGAATATTTAAAATAAGCTTATATTTAAATATATTAATAT 9421
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
||||||| ||||||| | || |||||| ||||||| || | | |||| ||
Sbjct 9420 AAAATAATAAAATAGGATATATAATTTTATTTTATTGGTTTTTAAAATTGTTATAATAAT 9361
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||||||||||| | ||| | | |||| |||| | | |||| |||||||| |||||||
Sbjct 9360 TAATAGGGATAATTAAAGGTATTAATATTTAATTATTAAAGGTAAAATTCTTAGATTTAT 9301
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
|||| |||||||| | ||||| || | || ||| |||| |||||| | || |||
Sbjct 9300 TGAAAACTAACTATTATAAAAGCATTTATTAAAGATATTTTTATTAATTA-AAAATAAAA 9242
Query 311 GTTAGGGG 318
|||||||
Sbjct 9241 ATTAGGGG 9234
Score = 93.3 bits (102), Expect = 8e-17
Identities = 172/251 (69%), Gaps = 1/251 (0%)
Strand=Plus/Plus
Query 68 AGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAG 127
|||||||||| | ||||||||||| | | || |||| | || | | | |||| ||||
Sbjct 15092 AGGACTTTTATTATGAAAAAATTAAAATATTTAAAGTAAGCTTATATTTAAATATATTAA 15151
Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAAT 187
|| ||||||| |||| | | || |||||| || |||||| || ||||
Sbjct 15152 TATAAAATAATAAAATAAAATATATAATTTTATTTTATTAATTTCTAAGATTATTATAAT 15211
Query 188 GATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATT 247
|||||||||| ||| | ||| | | ||| |||| | | |||| |||||||| ||||
Sbjct 15212 GATTAATAGGAATAATTAAAGGTATTAATATATAATTATTAAAGGTAAAATTCTTAGATT 15271
Query 248 TATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACG 307
|||| || | ||| || | |||| || | || || |||| |||||| | ||
Sbjct 15272 TATTAAAAATTAATTATTATAAAAGTATTTATTAATAATATTTTTATTAATTA-AAAATA 15330
Query 308 AAAGTTAGGGG 318
||||||| |||
Sbjct 15331 AAAGTTAAGGG 15341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915195378240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |