Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20CO27-5_20[genbank_20GCA_5F002120305.1_202017-05- 11] 505 sequences; 46,585,682 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq230 104 7e-20 >seq230 Length=64647 Score = 104 bits (114), Expect = 7e-20 Identities = 201/297 (68%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 190 CCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCAT 249 |||||||| ||| || ||| || |||||||| ||| || || | || || || Sbjct 57473 CCTACCATTAAAAATTAATAAGGTAGAAATTTAAATAAATTATTACTAATATAAAGCTAT 57414 Query 250 GCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCT 309 ||| |||||||||| |||||| || || || | || ||||| |||| Sbjct 57413 ATAATTTAAGAAGTTATTATAAATCACTAAAAAGTTTTAAAAAGTATTAATTTTTAATCT 57354 Query 310 AATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCAC 369 |||||||| | ||||| |||| | |||||| || ||||| || || |||||||| Sbjct 57353 AATAAATATATCCCTTTATAAGTTAAGATTTTTAATATATATTAACTTTAAAATTACCAT 57294 Query 370 GGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429 |||| | ||| ||| || ||| ||||||| |||| | ||||||| | |||| Sbjct 57293 AATTATTTAAGTAATAAAATATTATTAAATAAATAATAATTAATTTAATAAATTATTCAT 57234 Query 430 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAA 486 | ||| | |||| ||| ||||| ||| | || || |||||||||| ||| || Sbjct 57233 AATTTTATAATATAAATTATTTATATTTAAATATATATAACTTAATCTTTAAGATAA 57177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510392372480