Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq334 208 6e-49
seq434 199 3e-46
>seq334
Length=652976
Score = 208 bits (230), Expect = 6e-49
Identities = 573/864 (66%), Gaps = 38/864 (4%)
Strand=Plus/Plus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| |||| |||||||| ||| ||||||||||||||||| | |||||| | ||| |
Sbjct 128368 ATCTGGCAGATGTACAAGAAGCACGAAGCTTCCTTCTGGACCGCTGAGGAGATTGATCTC 128427
Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTTATCGAGCGGTGA--ACAACAT-TTCATT 61200
||||| || | | |||||| | || || | || ||| | || | |||||
Sbjct 128428 TCCAAGGATCTCCACGACTGGAGCAACCGCCTA---AACGATGATGAGAAGTTCTTCATC 128484
Query 61201 AAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260
|| | | || || || ||||| || ||||| || ||||| ||||| | | ||
Sbjct 128485 TCCCACATCCTTGCCTTTTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTTGTCGAG 128544
Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320
|| ||| | ||||| || | | |||||||| || |||||||| ||||||||
Sbjct 128545 CGATTCTCTGGCGAGGTCCAGATTCCCGAGGCGCGATGCTTCTACGGTTTCCAGATCATG 128604
Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380
|||||||| ||||||| |||| ||| | | ||||| || || ||||||| |||||
Sbjct 128605 ATGGAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGACACATACATCAAGGAGCCC 128664
Query 61381 GCG--GAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGC----G 61433
|| ||| || | || | ||||| |||||||| || || || || | | |
Sbjct 128665 GCCCAGAA---GACCCATCTCTTCAACGCCATCGACACCATCCCT----TGCATCCGCAG 128717
Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATT 61493
||| ||||| |||||| | | |||||| | | | | | || || | | || ||
Sbjct 128718 GAAGGCGGACTGGGCCCTGCACTGGATCGCTGACAAGAAGTCCACCTTCGCCCAGCGTTT 128777
Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553
| | || ||||| | |||||||| | || ||||| || | || ||| | ||||| ||
Sbjct 128778 GATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTG 128837
Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613
| | ||||| ||||| || |||||||| ||||||||| || ||| | || || || ||
Sbjct 128838 GCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCTAACGAGCTCATCTCGCGTGA 128897
Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673
|||||| | || || || || | || ||| ||| | || || || ||
Sbjct 128898 CGAGGGTCTCCACACCGACTTCGCCTGCCTACTGTTCT--CGC-ACCTCAACAACCGCCC 128954
Query 61674 GTCGG--AGGAGCGTGTGGGTGAGATTGTTCGT----GAGGCGGTAACTATCGAACAGGA 61727
||| |||| ||| | ||| | || | || || || | ||||| |||||
Sbjct 128955 --CGGCAAGGA---TGTCGTCCAGAA-GATCATCACAGATGCCGTCGCCATCGAGCAGGA 129008
Query 61728 ATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCA 61787
||| |||| || || ||||| | | || |||||||||| || ||| |||
Sbjct 129009 ATTCTTGACGGAGGCACTGCCCTGCGCCCTACTCGGCATGAACGCCAACCTCATGAAGCA 129068
Query 61788 GTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAA 61847
||| || || || || ||||||||||| ||||||| | |||| || | | ||
Sbjct 129069 GTACATCGAGTTCGTCGCCGACCGTCTATTGGTCGCCCTCGGTAACGAGAAGGTGTACCG 129128
Query 61848 TACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907
| | |||||| || || |||||||| | || || || | ||||||||| || || ||
Sbjct 129129 CGCCACAAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTT 129188
Query 61908 CGAGAAACGTGTAGGCGACTATCA 61931
|||||| || || |||||||| ||
Sbjct 129189 CGAGAAGCGCGTCGGCGACTACCA 129212
>seq434
Length=564148
Score = 199 bits (220), Expect = 3e-46
Identities = 426/631 (68%), Gaps = 4/631 (1%)
Strand=Plus/Minus
Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067
||||| || || | |||||| ||||| | ||||||||| || | ||||||| || ||
Sbjct 552581 GCAAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCA 552522
Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127
||||| || || || ||| || || || | |||| || || |||||||| |||||
Sbjct 552521 GTGCAGAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 552462
Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187
||||||||| | |||| | || | || |||||| || | || | ||||| | |
Sbjct 552461 TGATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATAC 552402
Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTT-TGCGTTCGTAATGTTCGT 66245
|| || | ||||| | | | | | ||| | ||| | ||| |||||| | ||||
Sbjct 552401 CACAGCTTCTGAGCCTTAATCTTCTGG-CGGCCACGACCCTCTGC-TTCGTACTTCTCGT 552344
Query 66246 AGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACA 66305
| ||| || || || || | || |||| || | || || | || || ||||
Sbjct 552343 ACAGGGCCTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGCACA 552284
Query 66306 TCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGG 66365
| || | ||| || |||| || || ||||| ||| || || || || ||||| || |
Sbjct 552283 TGAGGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAG 552224
Query 66366 CGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGA 66425
| ||| ||||| || || || || || ||||||| || || || | ||| ||||
Sbjct 552223 CCAGGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGA 552164
Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485
|||| || | || | ||||| || || || |||||||| || | || | |||
Sbjct 552163 ACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGT 552104
Query 66486 CGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCC 66545
|||||| ||||| ||||| | ||| || ||||||||||| | ||| ||||| | |
Sbjct 552103 TGCCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATAC 552044
Query 66546 CGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACAT 66605
|||| || |||| || |||||| | ||| || || || || || ||| | |
Sbjct 552043 CGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGT 551984
Query 66606 TCAGACCAATACCACCGGCCGTCTTCGAGAT 66636
| |||||||||||||||||| |||| |||||
Sbjct 551983 TGAGACCAATACCACCGGCCATCTTGGAGAT 551953
Score = 118 bits (130), Expect = 8e-22
Identities = 316/476 (66%), Gaps = 12/476 (3%)
Strand=Plus/Minus
Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137
||||| ||||||||||| | | ||||| || | || | ||| ||||||||||| |||
Sbjct 553493 TCGACGGTGAACTGGATAGGAGCGGCAGCGGCTTGTGTACGAAGGTAGTACATGCCAGTC 553434
Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCT 65195
|| || || ||| |||| || |||||||| || |||| |||| | | | || |
Sbjct 553433 TTCAGTCCGAGCTT-CCAACCAGTAAAATGCATAC-TGGTAATCTTGCCCATAGTGGGTT 553376
Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255
| || || || |||| ||| || ||| || ||| | |||||| || || ||||
Sbjct 553375 CTCTCATGTGGATGTTCAGCGATTGGGACTGGTCAATGAATGCACCACGGTCAGCGGCCA 553316
Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315
| | | | | || || || ||||| ||||||||||| || || ||
Sbjct 553315 TCTGGACAACAGTTCGCTGAGAGATTTCCCAAACGGTCTTGTAGAGAGCCTTTATATCGG 553256
Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375
|| | | ||||| ||| | ||||| | ||||| || || || |||
Sbjct 553255 CAGGGRTGTTAGGAATGTTCTGAATCGAACCGCCCTCAGCAATGATACGGTTCTTCATGC 553196
Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGATGACT 65431
|| ||||| | ||||| ||| | ||||| |||| |||||| | |||| ||
Sbjct 553195 TATCAGACCAGAGACCCATATCAACAAGATCCTTGAGTAACCAAGGG----TTGACAACC 553140
Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491
||||| ||||| | || ||||| ||| |||||| || || ||| || || ||| ||
Sbjct 553139 TGGAATTCGCCAGCAAGGACACGGCGGGAATAGATATTCGAGGTGTAAGGCTCGAAGCAT 553080
Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547
||| |||| || || || |||| |||| || || |||||||| |||||||||||
Sbjct 553079 TCATTGTTACCCAGGATCTGGGAAGTACTGGCTGTAGGCATGGGGGCGACCAACAA 553024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397564390206800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |