Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq334 208 6e-49 seq434 199 3e-46 >seq334 Length=652976 Score = 208 bits (230), Expect = 6e-49 Identities = 573/864 (66%), Gaps = 38/864 (4%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||| ||||||||||||||||| | |||||| | ||| | Sbjct 128368 ATCTGGCAGATGTACAAGAAGCACGAAGCTTCCTTCTGGACCGCTGAGGAGATTGATCTC 128427 Query 61147 TCCAAAGACATGAATGACTGGG---AGCGTTTATCGAGCGGTGA--ACAACAT-TTCATT 61200 ||||| || | | |||||| | || || | || ||| | || | ||||| Sbjct 128428 TCCAAGGATCTCCACGACTGGAGCAACCGCCTA---AACGATGATGAGAAGTTCTTCATC 128484 Query 61201 AAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAA 61260 || | | || || || ||||| || ||||| || ||||| ||||| | | || Sbjct 128485 TCCCACATCCTTGCCTTTTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTTGTCGAG 128544 Query 61261 CGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 || ||| | ||||| || | | |||||||| || |||||||| |||||||| Sbjct 128545 CGATTCTCTGGCGAGGTCCAGATTCCCGAGGCGCGATGCTTCTACGGTTTCCAGATCATG 128604 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 |||||||| ||||||| |||| ||| | | ||||| || || ||||||| ||||| Sbjct 128605 ATGGAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGACACATACATCAAGGAGCCC 128664 Query 61381 GCG--GAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGC----G 61433 || ||| || | || | ||||| |||||||| || || || || | | | Sbjct 128665 GCCCAGAA---GACCCATCTCTTCAACGCCATCGACACCATCCCT----TGCATCCGCAG 128717 Query 61434 GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATT 61493 ||| ||||| |||||| | | |||||| | | | | | || || | | || || Sbjct 128718 GAAGGCGGACTGGGCCCTGCACTGGATCGCTGACAAGAAGTCCACCTTCGCCCAGCGTTT 128777 Query 61494 GCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTG 61553 | | || ||||| | |||||||| | || ||||| || | || ||| | ||||| || Sbjct 128778 GATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTG 128837 Query 61554 GTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGA 61613 | | ||||| ||||| || |||||||| ||||||||| || ||| | || || || || Sbjct 128838 GCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCTAACGAGCTCATCTCGCGTGA 128897 Query 61614 CGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCC 61673 |||||| | || || || || | || ||| ||| | || || || || Sbjct 128898 CGAGGGTCTCCACACCGACTTCGCCTGCCTACTGTTCT--CGC-ACCTCAACAACCGCCC 128954 Query 61674 GTCGG--AGGAGCGTGTGGGTGAGATTGTTCGT----GAGGCGGTAACTATCGAACAGGA 61727 ||| |||| ||| | ||| | || | || || || | ||||| ||||| Sbjct 128955 --CGGCAAGGA---TGTCGTCCAGAA-GATCATCACAGATGCCGTCGCCATCGAGCAGGA 129008 Query 61728 ATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCA 61787 ||| |||| || || ||||| | | || |||||||||| || ||| ||| Sbjct 129009 ATTCTTGACGGAGGCACTGCCCTGCGCCCTACTCGGCATGAACGCCAACCTCATGAAGCA 129068 Query 61788 GTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAA 61847 ||| || || || || ||||||||||| ||||||| | |||| || | | || Sbjct 129069 GTACATCGAGTTCGTCGCCGACCGTCTATTGGTCGCCCTCGGTAACGAGAAGGTGTACCG 129128 Query 61848 TACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTT 61907 | | |||||| || || |||||||| | || || || | ||||||||| || || || Sbjct 129129 CGCCACAAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTT 129188 Query 61908 CGAGAAACGTGTAGGCGACTATCA 61931 |||||| || || |||||||| || Sbjct 129189 CGAGAAGCGCGTCGGCGACTACCA 129212 >seq434 Length=564148 Score = 199 bits (220), Expect = 3e-46 Identities = 426/631 (68%), Gaps = 4/631 (1%) Strand=Plus/Minus Query 66008 GCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCG 66067 ||||| || || | |||||| ||||| | ||||||||| || | ||||||| || || Sbjct 552581 GCAAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCA 552522 Query 66068 GTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCAT 66127 ||||| || || || ||| || || || | |||| || || |||||||| ||||| Sbjct 552521 GTGCAGAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAG 552462 Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 ||||||||| | |||| | || | || |||||| || | || | ||||| | | Sbjct 552461 TGATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATAC 552402 Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTT-TGCGTTCGTAATGTTCGT 66245 || || | ||||| | | | | | ||| | ||| | ||| |||||| | |||| Sbjct 552401 CACAGCTTCTGAGCCTTAATCTTCTGG-CGGCCACGACCCTCTGC-TTCGTACTTCTCGT 552344 Query 66246 AGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACA 66305 | ||| || || || || | || |||| || | || || | || || |||| Sbjct 552343 ACAGGGCCTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGCACA 552284 Query 66306 TCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGG 66365 | || | ||| || |||| || || ||||| ||| || || || || ||||| || | Sbjct 552283 TGAGGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAG 552224 Query 66366 CGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGA 66425 | ||| ||||| || || || || || ||||||| || || || | ||| |||| Sbjct 552223 CCAGGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGA 552164 Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485 |||| || | || | ||||| || || || |||||||| || | || | ||| Sbjct 552163 ACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGT 552104 Query 66486 CGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCC 66545 |||||| ||||| ||||| | ||| || ||||||||||| | ||| ||||| | | Sbjct 552103 TGCCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATAC 552044 Query 66546 CGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACAT 66605 |||| || |||| || |||||| | ||| || || || || || ||| | | Sbjct 552043 CGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGT 551984 Query 66606 TCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 | |||||||||||||||||| |||| ||||| Sbjct 551983 TGAGACCAATACCACCGGCCATCTTGGAGAT 551953 Score = 118 bits (130), Expect = 8e-22 Identities = 316/476 (66%), Gaps = 12/476 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| ||||||||||| | | ||||| || | || | ||| ||||||||||| ||| Sbjct 553493 TCGACGGTGAACTGGATAGGAGCGGCAGCGGCTTGTGTACGAAGGTAGTACATGCCAGTC 553434 Query 65138 TTGAGGCC-AGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATA-ATTCGGCT 65195 || || || ||| |||| || |||||||| || |||| |||| | | | || | Sbjct 553433 TTCAGTCCGAGCTT-CCAACCAGTAAAATGCATAC-TGGTAATCTTGCCCATAGTGGGTT 553376 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || |||| ||| || ||| || ||| | |||||| || || |||| Sbjct 553375 CTCTCATGTGGATGTTCAGCGATTGGGACTGGTCAATGAATGCACCACGGTCAGCGGCCA 553316 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | | | | | || || || ||||| ||||||||||| || || || Sbjct 553315 TCTGGACAACAGTTCGCTGAGAGATTTCCCAAACGGTCTTGTAGAGAGCCTTTATATCGG 553256 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATCG 65375 || | | ||||| ||| | ||||| | ||||| || || || ||| Sbjct 553255 CAGGGRTGTTAGGAATGTTCTGAATCGAACCGCCCTCAGCAATGATACGGTTCTTCATGC 553196 Query 65376 ACTCTGACCACAAACCCAAATCGATAAGATG-TTGA---ACCAAGTGACGATTGATGACT 65431 || ||||| | ||||| ||| | ||||| |||| |||||| | |||| || Sbjct 553195 TATCAGACCAGAGACCCATATCAACAAGATCCTTGAGTAACCAAGGG----TTGACAACC 553140 Query 65432 TGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGAT 65491 ||||| ||||| | || ||||| ||| |||||| || || ||| || || ||| || Sbjct 553139 TGGAATTCGCCAGCAAGGACACGGCGGGAATAGATATTCGAGGTGTAAGGCTCGAAGCAT 553080 Query 65492 TCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAA 65547 ||| |||| || || || |||| |||| || || |||||||| ||||||||||| Sbjct 553079 TCATTGTTACCCAGGATCTGGGAAGTACTGGCTGTAGGCATGGGGGCGACCAACAA 553024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564390206800